[ROI Imaging] Support NNMA on stacks of images #520
Workflow file for this run
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| # This is a basic workflow to help you get started with Actions | |
| name: CI | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build" | |
| build: | |
| name: "Python ${{ matrix.python-version }} on ${{ matrix.os }} ${{ matrix.name-suffix }}" | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| # do not cancel tests after first fail | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - name-suffix: "(Minimum Versions)" | |
| os: ubuntu-latest | |
| python-version: 3.7 | |
| BUILD_COMMAND: sdist | |
| QT_BINDING: PyQt5==5.14.1 | |
| XVFB_RUN: xvfb-run -a | |
| - name-suffix: "PySide6 sdist" | |
| os: ubuntu-latest | |
| python-version: 3.8 | |
| BUILD_COMMAND: sdist | |
| QT_BINDING: PySide6 | |
| XVFB_RUN: xvfb-run -a | |
| - name-suffix: "PySide6 bdist_wheel" | |
| os: ubuntu-latest | |
| python-version: "3.10" | |
| BUILD_COMMAND: bdist_wheel | |
| QT_BINDING: PySide6 | |
| XVFB_RUN: xvfb-run -a | |
| - name-suffix: "PyQt5 bdist_wheel" | |
| os: ubuntu-latest | |
| python-version: "3.10" | |
| BUILD_COMMAND: bdist_wheel | |
| QT_BINDING: PyQt5 | |
| XVFB_RUN: xvfb-run -a | |
| - name-suffix: "PyQt6 bdist_wheel" | |
| os: macos-latest | |
| python-version: 3.11 | |
| BUILD_COMMAND: bdist_wheel | |
| QT_BINDING: PyQt6 | |
| XVFB_RUN: "" | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 | |
| - name: Install OS dependencies | |
| run: | | |
| case "${{ runner.os }}" in | |
| Linux) | |
| sudo apt-get update -yy | |
| sudo apt-get install -yy \ | |
| libxkbcommon-x11-0 \ | |
| libxkbcommon0 \ | |
| libxkbcommon-dev \ | |
| libxcb-icccm4 \ | |
| libxcb-image0 \ | |
| libxcb-shm0 \ | |
| libxcb-keysyms1 \ | |
| libxcb-randr0 \ | |
| libxcb-render-util0 \ | |
| libxcb-render0 \ | |
| libxcb-shape0 \ | |
| libxcb-sync1 \ | |
| libxcb-xfixes0 \ | |
| libxcb-xinerama0 \ | |
| libxcb-xkb1 \ | |
| libxcb1 | |
| #export QT_QPA_PLATFORM=offscreen | |
| export DISPLAY=:99.0 | |
| ;; | |
| macOS) | |
| # curl -o miniconda_installer.sh "https://repo.anaconda.com/miniconda/Miniconda3-latest-MacOSX-x86_64.sh" | |
| # bash miniconda_installer.sh -b -p miniconda | |
| # export PATH="`pwd`/miniconda/bin":$PATH | |
| ;; | |
| esac | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # Display the python version | |
| - name: Display Python version | |
| run: | |
| python -c "import sys; print(sys.version)" | |
| - name: Upgrade distribution modules | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --upgrade setuptools | |
| # if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| - name: Install build dependencies | |
| run: | | |
| pip install --upgrade wheel | |
| pip install --upgrade numpy | |
| # put cython | |
| pip install cython | |
| - name: Install runtime dependencies | |
| run: | | |
| # pip install silx --pre --find-links https://silx.gitlab-pages.esrf.fr/bob/silx/ | |
| pip install ${{ matrix.QT_BINDING }} | |
| - name: Print python info | |
| run: | | |
| python ./ci/info_platform.py | |
| pip list | |
| - name: Generate source package or wheel | |
| run: | | |
| python setup.py ${{ matrix.BUILD_COMMAND }} | |
| ls dist | |
| - name: Install from source package | |
| run: | | |
| for filename in dist/PyMca5*.*; do | |
| echo "\nInstall $filename" | |
| pip install --pre $filename | |
| done | |
| - name: Run the tests | |
| run: | | |
| cd .. | |
| ${{ matrix.XVFB_RUN }} python -m PyMca5.tests.TestAll |