feat: Adding Mehari Api and models

[xiamaz]

• seqvar mehari api
• strucvar mehari api
• api endpoints
• hydrate variants with mehari api

[github-actions]

deps-report 🔍

Commit scanned: 68b1d48
ℹ️ Python version 3.10 is used by your project but the latest version is 3.12.

Vulnerable dependencies

1 dependencies have vulnerabilities 😱

Dependency	Advisory	Versions impacted
sqlalchemy	Sqlalchemy 2.0.0b1 avoids leaking cleartext passwords to the open for careless uses of str(engine.URL()) in logs and prints. sqlalchemy/sqlalchemy#8563	<2.0.0b1

Outdated dependencies

35 outdated dependencies found (including 13 outdated major versions)😢

Dependency	Installed version	Latest version
argon2-cffi (transitive)	21.3.0	23.1.0
billiard (transitive)	3.6.4.0	4.1.0
coverage (dev,transitive)	6.5.0	7.3.2
django	3.2.22	4.2.6
mistune (transitive)	2.0.5	3.0.2
protobuf	3.20.1	4.24.4
pydantic (transitive)	1.10.13	2.4.2
setuptools (transitive)	67.6.1	68.2.2
sphinx (transitive)	6.2.1	7.2.6
sqlalchemy	1.4.49	2.0.22
unidecode (transitive)	0.4.21	1.3.7
urllib3 (transitive)	1.26.17	2.0.6
xlsxwriter	1.4.5	3.1.7

Dependency	Installed version	Latest version
aiobotocore (transitive)	2.5.4	2.6.0
botocore (transitive)	1.31.17	1.31.63
celery (transitive)	5.2.7	5.3.4
django-autocomplete-light (transitive)	3.9.4	3.9.7
django-environ (transitive)	0.10.0	0.11.2
django-iconify (transitive)	0.1.1	0.3
django-postgres-copy	2.3.7	2.7.3
docutils (transitive)	0.18.1	0.20.1
faker (dev,transitive)	19.6.2	19.10.0
jedi (dev)	0.17.2	0.19.1
markdown (transitive)	3.4.1	3.5
parameterized (dev)	0.8.1	0.9.0
parso (dev,transitive)	0.7.1	0.8.3
pycodestyle (dev,transitive)	2.11.0	2.11.1
pysam	0.21.0	0.22.0
requests-http-signature	0.2.0	0.7.1
rpds-py (transitive)	0.10.4	0.10.6
selenium (dev)	4.13.0	4.14.0
sentry-sdk	1.31.0	1.32.0
sphinx-rtd-theme (transitive)	1.2.2	1.3.0
versioneer (transitive)	0.28	0.29
wheel (transitive)	0.40.0	0.41.2

_Logs

[codecov]

Codecov Report

Merging #1175 (68b1d48) into main (fe5a3dd) will increase coverage by 0.11%.
The diff coverage is 96.33%.

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #1175      +/-   ##
==========================================
+ Coverage   71.16%   71.27%   +0.11%     
==========================================
  Files         382      386       +4     
  Lines       24209    24316     +107     
  Branches     1565     1565              
==========================================
+ Hits        17229    17332     +103     
- Misses       6980     6984       +4     

Files	Coverage Δ
svs/models/mehari.py	100.00% <100.00%> (ø)
variants/models/mehari.py	100.00% <100.00%> (ø)
variants/queries.py	96.63% <100.00%> (+0.02%)	⬆️
variants/urls/__init__.py	100.00% <ø> (ø)
svs/submit_mehari.py	93.33% <93.33%> (ø)
variants/submit_mehari.py	93.33% <93.33%> (ø)
variants/views/api/__init__.py	54.52% <90.47%> (+0.90%)	⬆️