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feat: adjust "strucvars query" to read ingested VCFs (#202) #220

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Oct 11, 2023
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wip
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holtgrewe committed Oct 11, 2023
commit 1b81b03288dc195dc127959b7e4a8cae90a3b144
6 changes: 5 additions & 1 deletion src/strucvars/query/genes.rs
Original file line number Diff line number Diff line change
@@ -327,7 +327,11 @@ pub fn load_gene_db(path_db: &str, genome_release: GenomeRelease) -> Result<Gene
)?,
xlink: load_xlink_db(Path::new(path_db).join("noref/genes/xlink.bin").as_path())?,
acmg: load_acmg_db(Path::new(path_db).join("noref/genes/acmg.tsv").as_path())?,
mim2gene: load_mim2gene_db(Path::new(path_db).join("noref/genes/mim2gene.tsv").as_path())?,
mim2gene: load_mim2gene_db(
Path::new(path_db)
.join("noref/genes/mim2gene.tsv")
.as_path(),
)?,
};

Ok(result)
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