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fix: allow parsing FORMAT/anc as Float/f32 #1253

fix: allow parsing FORMAT/anc as Float/f32

fix: allow parsing FORMAT/anc as Float/f32 #1253

Triggered via pull request July 25, 2024 11:11
@holtgreweholtgrewe
opened #414
Status Success
Total duration 14s
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6 warnings
using `clone` on type `SvRecord` which implements the `Copy` trait: src/strucvars/query/clinvar.rs#L46
warning: using `clone` on type `SvRecord` which implements the `Copy` trait --> src/strucvars/query/clinvar.rs:46:22 | 46 | .map(|e| self.records[chrom_idx][*e.data() as usize].clone()) | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: try removing the `clone` call: `self.records[chrom_idx][*e.data() as usize]` | = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#clone_on_copy = note: `#[warn(clippy::clone_on_copy)]` on by default
field `n_total` is never read: src/strucvars/txt_to_bin/vardbs/input.rs#L150
warning: field `n_total` is never read --> src/strucvars/txt_to_bin/vardbs/input.rs:150:9 | 140 | pub struct GnomadCnv4Record { | ---------------- field in this struct ... 150 | pub n_total: u32, | ^^^^^^^ | = note: `GnomadCnv4Record` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
fields `male_n_homref`, `male_n_hemiref`, `female_n_homref`, and `cnv_n_total` are never read: src/strucvars/txt_to_bin/vardbs/input.rs#L117
warning: fields `male_n_homref`, `male_n_hemiref`, `female_n_homref`, and `cnv_n_total` are never read --> src/strucvars/txt_to_bin/vardbs/input.rs:117:9 | 107 | pub struct GnomadSv4Record { | --------------- fields in this struct ... 117 | pub male_n_homref: u32, | ^^^^^^^^^^^^^ ... 123 | pub male_n_hemiref: u32, | ^^^^^^^^^^^^^^ ... 127 | pub female_n_homref: u32, | ^^^^^^^^^^^^^^^ ... 133 | pub cnv_n_total: u32, | ^^^^^^^^^^^ | = note: `GnomadSv4Record` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
field `num_carriers` is never read: src/strucvars/txt_to_bin/vardbs/input.rs#L20
warning: field `num_carriers` is never read --> src/strucvars/txt_to_bin/vardbs/input.rs:20:9 | 12 | pub struct DbVarRecord { | ----------- field in this struct ... 20 | pub num_carriers: u32, | ^^^^^^^^^^^^ | = note: `DbVarRecord` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
field `label` is never read: src/strucvars/txt_to_bin/masked.rs#L28
warning: field `label` is never read --> src/strucvars/txt_to_bin/masked.rs:28:13 | 20 | pub struct Record { | ------ field in this struct ... 28 | pub label: String, | ^^^^^ | = note: `Record` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis = note: `#[warn(dead_code)]` on by default
use of deprecated method `itertools::Itertools::group_by`: Use .chunk_by() instead: src/seqvars/query/mod.rs#L297
warning: use of deprecated method `itertools::Itertools::group_by`: Use .chunk_by() instead --> src/seqvars/query/mod.rs:297:14 | 297 | .group_by(|by_hgnc_id| by_hgnc_id.hgnc_id.clone()) | ^^^^^^^^ | = note: `#[warn(deprecated)]` on by default