feat: add gnomAD SV/CNV v4 support #543

	name: check-urls

	on:
	push:
	branches:
	- main
	pull_request:
	branches:
	- main
	workflow_dispatch:
	schedule:
	# ┌───────────── minute (0 - 59)
	# │ ┌───────────── hour (0 - 23)
	# │ │ ┌───────────── day of the month (1 - 31)
	# │ │ │ ┌───────────── month (1 - 12 or JAN-DEC)
	# │ │ │ │ ┌───────────── day of the week (0 - 6 or SUN-SAT)
	# │ │ │ │ │
	# │ │ │ │ │
	# │ │ │ │ │
	# * * * * *
	- cron: '49 2 * * *'

	jobs:
	Check-Remote-URLs:
	runs-on: ubuntu-latest
	steps:
	- name: Checkout repository
	uses: actions/checkout@v3
	with:
	lfs: true

	- name: Setup formatting environment
	uses: mamba-org/setup-micromamba@v1
	with:
	environment-file: environment.yml
	init-shell: bash
	cache-environment: true
	post-cleanup: 'all'

	- name: Install python package
	run: \|
	pip install -e .
	shell: bash -el {0}

	- name: Check availability to upstream URLs
	run: \|
	varfish-db-downloader wget urls-check-upstream
	shell: bash -el {0}

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