chore: org change bihealth => varfish-org

.github/ISSUE_TEMPLATE/bug_report.md

@@ -10,7 +10,7 @@ assignees: ''
 <!--
 For general questions please use the Discussions section of the project:
 
-https://github.com/bihealth/varfish-server/discussions
+https://github.com/varfish-org/varfish-server/discussions
 
 For bug reports and feature requests please open a ticket using the templates!
 -->

.github/ISSUE_TEMPLATE/feature_request.md

@@ -10,7 +10,7 @@ assignees: ''
 <!--
 For general questions please use the Discussions section of the project:
 
-https://github.com/bihealth/varfish-server/discussions
+https://github.com/varfish-org/varfish-server/discussions
 
 For bug reports and feature requests please open a ticket using the templates!
 -->

.github/workflows/release-please.yml

@@ -7,7 +7,7 @@ name: release-please
 
 jobs:
   release-please:
-    if: github.repository_owner == 'bihealth'
+    if: github.repository_owner == 'varfish-org'
     runs-on: ubuntu-latest
     steps:
       - uses: GoogleCloudPlatform/release-please-action@v3

Cargo.toml

@@ -5,7 +5,7 @@ edition = "2021"
 authors = ["Manuel Holtgrewe <[email protected]>"]
 description = "Port of biocommons/hgvs to Rust"
 license = "Apache-2.0"
-homepage = "https://github.com/bihealth/hgvs-rs"
+homepage = "https://github.com/varfish-org/hgvs-rs"
 readme = "README.md"
 rust-version = "1.64.0"
 

README.md

@@ -1,8 +1,8 @@
 [![Crates.io](https://img.shields.io/crates/d/hgvs.svg)](https://crates.io/crates/hgvs)
 [![Crates.io](https://img.shields.io/crates/v/hgvs.svg)](https://crates.io/crates/hgvs)
 [![Crates.io](https://img.shields.io/crates/l/hgvs.svg)](https://crates.io/crates/hgvs)
-[![CI](https://github.com/bihealth/hgvs-rs/actions/workflows/rust.yml/badge.svg)](https://github.com/bihealth/hgvs-rs/actions/workflows/rust.yml)
-[![codecov](https://codecov.io/gh/bihealth/hgvs-rs/branch/main/graph/badge.svg?token=aZchhLWdzt)](https://codecov.io/gh/bihealth/hgvs-rs)
+[![CI](https://github.com/varfish-org/hgvs-rs/actions/workflows/rust.yml/badge.svg)](https://github.com/varfish-org/hgvs-rs/actions/workflows/rust.yml)
+[![codecov](https://codecov.io/gh/varfish-org/hgvs-rs/branch/main/graph/badge.svg?token=aZchhLWdzt)](https://codecov.io/gh/varfish-org/hgvs-rs)
 [![DOI](https://zenodo.org/badge/601272076.svg)](https://zenodo.org/badge/latestdoi/601272076)
 
 # hgvs-rs
@@ -22,7 +22,7 @@ export TEST_UTA_DATABASE_URL=postgres://anonymous:[email protected]:/
 export TEST_UTA_DATABASE_SCHEMA=uta_20210129
 ```
 
-Note that [seqrepo-rs](https://github.com/bihealth/seqrepo-rs) is used for access to the genome contig sequence.
+Note that [seqrepo-rs](https://github.com/varfish-org/seqrepo-rs) is used for access to the genome contig sequence.
 It is inconvenient to provide sub sets of sequences in SeqRepo format.
 Instead, we use a build-cache/read-cache approach that is also used by `biocommons/hgvs`.
 

src/data/uta_sr.rs

@@ -2,7 +2,7 @@
 //!
 //! * https://github.com/biocommons/uta
 //! * https://github.com/biocommons/biocommons.seqrepo
-//! * https://github.com/bihealth/seqrepo-rs
+//! * https://github.com/varfish-org/seqrepo-rs
 
 use std::path::PathBuf;
 use std::sync::Arc;