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build(deps): bump the noodles group with 7 updates #359

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@dependabot dependabot bot commented on behalf of github Dec 18, 2023

Bumps the noodles group with 7 updates:

Package From To
noodles-bed 0.10.0 0.11.0
noodles-bgzf 0.25.0 0.26.0
noodles-core 0.12.0 0.13.0
noodles-csi 0.28.0 0.29.0
noodles-tabix 0.34.0 0.35.0
noodles-vcf 0.47.0 0.48.0
noodles-gff 0.25.0 0.26.0

Updates noodles-bed from 0.10.0 to 0.11.0

Commits
  • a185294 Bump versions for noodles 0.60.0
  • c790016 sam/lazy/record: Add wrapper for mapping quality
  • d7150f6 sam/lazy/record/cigar: Implement crate::alignment::record::Cigar for Cigar
  • f251100 sam/lazy/record/position: Implement crate::alignment::record::Position for Po...
  • 565fd62 sam/lazy/record/flags: Implement crate::alignment::record::Flags for Flags
  • bc181e1 sam/lazy/record/quality_scores: Implement crate::alignment::record::QualitySc...
  • b72f33b bam/lazy/record: Qualify types
  • 3e7a4a5 bam/lazy/record/quality_scores: Implement sam::alignment::record::QualityScor...
  • e1dee24 bam/lazy/record/read_name: Implement sam::alignment::record::ReadName for Rea...
  • 61b6f65 sam/lazy/record/sequence: Implement crate::alignment::record::Sequence for Se...
  • Additional commits viewable in compare view

Updates noodles-bgzf from 0.25.0 to 0.26.0

Commits
  • a185294 Bump versions for noodles 0.60.0
  • c790016 sam/lazy/record: Add wrapper for mapping quality
  • d7150f6 sam/lazy/record/cigar: Implement crate::alignment::record::Cigar for Cigar
  • f251100 sam/lazy/record/position: Implement crate::alignment::record::Position for Po...
  • 565fd62 sam/lazy/record/flags: Implement crate::alignment::record::Flags for Flags
  • bc181e1 sam/lazy/record/quality_scores: Implement crate::alignment::record::QualitySc...
  • b72f33b bam/lazy/record: Qualify types
  • 3e7a4a5 bam/lazy/record/quality_scores: Implement sam::alignment::record::QualityScor...
  • e1dee24 bam/lazy/record/read_name: Implement sam::alignment::record::ReadName for Rea...
  • 61b6f65 sam/lazy/record/sequence: Implement crate::alignment::record::Sequence for Se...
  • Additional commits viewable in compare view

Updates noodles-core from 0.12.0 to 0.13.0

Commits
  • a185294 Bump versions for noodles 0.60.0
  • c790016 sam/lazy/record: Add wrapper for mapping quality
  • d7150f6 sam/lazy/record/cigar: Implement crate::alignment::record::Cigar for Cigar
  • f251100 sam/lazy/record/position: Implement crate::alignment::record::Position for Po...
  • 565fd62 sam/lazy/record/flags: Implement crate::alignment::record::Flags for Flags
  • bc181e1 sam/lazy/record/quality_scores: Implement crate::alignment::record::QualitySc...
  • b72f33b bam/lazy/record: Qualify types
  • 3e7a4a5 bam/lazy/record/quality_scores: Implement sam::alignment::record::QualityScor...
  • e1dee24 bam/lazy/record/read_name: Implement sam::alignment::record::ReadName for Rea...
  • 61b6f65 sam/lazy/record/sequence: Implement crate::alignment::record::Sequence for Se...
  • Additional commits viewable in compare view

Updates noodles-csi from 0.28.0 to 0.29.0

Commits
  • a185294 Bump versions for noodles 0.60.0
  • c790016 sam/lazy/record: Add wrapper for mapping quality
  • d7150f6 sam/lazy/record/cigar: Implement crate::alignment::record::Cigar for Cigar
  • f251100 sam/lazy/record/position: Implement crate::alignment::record::Position for Po...
  • 565fd62 sam/lazy/record/flags: Implement crate::alignment::record::Flags for Flags
  • bc181e1 sam/lazy/record/quality_scores: Implement crate::alignment::record::QualitySc...
  • b72f33b bam/lazy/record: Qualify types
  • 3e7a4a5 bam/lazy/record/quality_scores: Implement sam::alignment::record::QualityScor...
  • e1dee24 bam/lazy/record/read_name: Implement sam::alignment::record::ReadName for Rea...
  • 61b6f65 sam/lazy/record/sequence: Implement crate::alignment::record::Sequence for Se...
  • Additional commits viewable in compare view

Updates noodles-tabix from 0.34.0 to 0.35.0

Commits
  • a185294 Bump versions for noodles 0.60.0
  • c790016 sam/lazy/record: Add wrapper for mapping quality
  • d7150f6 sam/lazy/record/cigar: Implement crate::alignment::record::Cigar for Cigar
  • f251100 sam/lazy/record/position: Implement crate::alignment::record::Position for Po...
  • 565fd62 sam/lazy/record/flags: Implement crate::alignment::record::Flags for Flags
  • bc181e1 sam/lazy/record/quality_scores: Implement crate::alignment::record::QualitySc...
  • b72f33b bam/lazy/record: Qualify types
  • 3e7a4a5 bam/lazy/record/quality_scores: Implement sam::alignment::record::QualityScor...
  • e1dee24 bam/lazy/record/read_name: Implement sam::alignment::record::ReadName for Rea...
  • 61b6f65 sam/lazy/record/sequence: Implement crate::alignment::record::Sequence for Se...
  • Additional commits viewable in compare view

Updates noodles-vcf from 0.47.0 to 0.48.0

Commits
  • a185294 Bump versions for noodles 0.60.0
  • c790016 sam/lazy/record: Add wrapper for mapping quality
  • d7150f6 sam/lazy/record/cigar: Implement crate::alignment::record::Cigar for Cigar
  • f251100 sam/lazy/record/position: Implement crate::alignment::record::Position for Po...
  • 565fd62 sam/lazy/record/flags: Implement crate::alignment::record::Flags for Flags
  • bc181e1 sam/lazy/record/quality_scores: Implement crate::alignment::record::QualitySc...
  • b72f33b bam/lazy/record: Qualify types
  • 3e7a4a5 bam/lazy/record/quality_scores: Implement sam::alignment::record::QualityScor...
  • e1dee24 bam/lazy/record/read_name: Implement sam::alignment::record::ReadName for Rea...
  • 61b6f65 sam/lazy/record/sequence: Implement crate::alignment::record::Sequence for Se...
  • Additional commits viewable in compare view

Updates noodles-gff from 0.25.0 to 0.26.0

Commits
  • a185294 Bump versions for noodles 0.60.0
  • c790016 sam/lazy/record: Add wrapper for mapping quality
  • d7150f6 sam/lazy/record/cigar: Implement crate::alignment::record::Cigar for Cigar
  • f251100 sam/lazy/record/position: Implement crate::alignment::record::Position for Po...
  • 565fd62 sam/lazy/record/flags: Implement crate::alignment::record::Flags for Flags
  • bc181e1 sam/lazy/record/quality_scores: Implement crate::alignment::record::QualitySc...
  • b72f33b bam/lazy/record: Qualify types
  • 3e7a4a5 bam/lazy/record/quality_scores: Implement sam::alignment::record::QualityScor...
  • e1dee24 bam/lazy/record/read_name: Implement sam::alignment::record::ReadName for Rea...
  • 61b6f65 sam/lazy/record/sequence: Implement crate::alignment::record::Sequence for Se...
  • Additional commits viewable in compare view

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Automatic rebases have been disabled on this pull request as it has been open for over 30 days.

@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Dec 18, 2023
@github-actions github-actions bot enabled auto-merge (squash) December 18, 2023 15:51
@dependabot dependabot bot force-pushed the dependabot/cargo/noodles-57a8988003 branch 2 times, most recently from 9650388 to 5607f6b Compare December 25, 2023 15:32
@dependabot dependabot bot force-pushed the dependabot/cargo/noodles-57a8988003 branch 2 times, most recently from e63321a to fa14a72 Compare January 1, 2024 15:04
@dependabot dependabot bot force-pushed the dependabot/cargo/noodles-57a8988003 branch 2 times, most recently from 7a48bcf to fcc1bcd Compare January 8, 2024 15:28
Bumps the noodles group with 7 updates:

| Package | From | To |
| --- | --- | --- |
| [noodles-bed](https://github.com/zaeleus/noodles) | `0.10.0` | `0.11.0` |
| [noodles-bgzf](https://github.com/zaeleus/noodles) | `0.25.0` | `0.26.0` |
| [noodles-core](https://github.com/zaeleus/noodles) | `0.12.0` | `0.13.0` |
| [noodles-csi](https://github.com/zaeleus/noodles) | `0.28.0` | `0.29.0` |
| [noodles-tabix](https://github.com/zaeleus/noodles) | `0.34.0` | `0.35.0` |
| [noodles-vcf](https://github.com/zaeleus/noodles) | `0.47.0` | `0.48.0` |
| [noodles-gff](https://github.com/zaeleus/noodles) | `0.25.0` | `0.26.0` |


Updates `noodles-bed` from 0.10.0 to 0.11.0
- [Commits](zaeleus/noodles@noodles-bed-0.10.0...noodles-bed-0.11.0)

Updates `noodles-bgzf` from 0.25.0 to 0.26.0
- [Commits](zaeleus/noodles@noodles-bgzf-0.25.0...noodles-bgzf-0.26.0)

Updates `noodles-core` from 0.12.0 to 0.13.0
- [Commits](zaeleus/noodles@noodles-core-0.12.0...noodles-core-0.13.0)

Updates `noodles-csi` from 0.28.0 to 0.29.0
- [Commits](zaeleus/noodles@noodles-csi-0.28.0...noodles-csi-0.29.0)

Updates `noodles-tabix` from 0.34.0 to 0.35.0
- [Commits](zaeleus/noodles@noodles-tabix-0.34.0...noodles-tabix-0.35.0)

Updates `noodles-vcf` from 0.47.0 to 0.48.0
- [Commits](zaeleus/noodles@noodles-vcf-0.47.0...noodles-vcf-0.48.0)

Updates `noodles-gff` from 0.25.0 to 0.26.0
- [Commits](zaeleus/noodles@noodles-gff-0.25.0...noodles-gff-0.26.0)

---
updated-dependencies:
- dependency-name: noodles-bed
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
- dependency-name: noodles-bgzf
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
- dependency-name: noodles-core
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
- dependency-name: noodles-csi
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
- dependency-name: noodles-tabix
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
- dependency-name: noodles-vcf
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
- dependency-name: noodles-gff
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: noodles
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot force-pushed the dependabot/cargo/noodles-57a8988003 branch from fcc1bcd to 1450308 Compare January 22, 2024 15:47
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dependabot bot commented on behalf of github Jan 29, 2024

Superseded by #395.

@dependabot dependabot bot closed this Jan 29, 2024
auto-merge was automatically disabled January 29, 2024 15:33

Pull request was closed

@dependabot dependabot bot deleted the dependabot/cargo/noodles-57a8988003 branch January 29, 2024 15:33
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