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Create proteore_tools.yaml #289

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92 changes: 92 additions & 0 deletions proteore_tools.yaml
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---
install_repository_dependencies: true
install_resolver_dependencies: true
install_tool_dependencies: false

tools:

## ProteoRE Data Manipulation

- name: proteore_id_converter
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_filter_keywords_values
owner: proteore
tool_panel_section_label: ProteoRE

## ProteoRE Get Features/Annotations

- name: proteore_prot_features_3orga
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_prot_features
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_expression_levels_by_tissue
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_expression_rnaseq_abbased
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_tissue_specific_expression_data
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_ms_observation_pepatlas
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_get_unique_peptide_srm_method
owner: proteore
tool_panel_section_label: ProteoRE

## ProteoRE Functional Analysis

- name: proteore_goprofiles
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_clusterprofiler
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_go_terms_enrich_comparison
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_topgo
owner: proteore
tool_panel_section_label: ProteoRE

## ProteoRE Pathway Analysis

- name: proteore_reactome
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_kegg_pathways_coverage
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_maps_visualization
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_build_protein_interaction_maps
owner: proteore
tool_panel_section_label: ProteoRE

## ProteoRE Visualization

- name: proteore_venn_diagram
owner: proteore
tool_panel_section_label: ProteoRE

- name: proteore_heatmap_visualization
owner: proteore
tool_panel_section_label: ProteoRE