Merge pull request #2307 from usegalaxy-au/cat-bro-patch-4

singularity for infernal and all krakentools tools
usegalaxy-au · Dec 2, 2024 · 679f0fa · 679f0fa
2 parents 9564acb + f7c18cb
commit 679f0fa
Showing 1 changed file with 6 additions and 0 deletions.
diff --git a/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml b/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml
@@ -266,6 +266,9 @@ tools:
       #scheduling:
       #  require:
       #  - pulsar-high-mem1
+  toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_.*:
+    params:
+      singularity_enabled: true
   toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/.*:
     context:
       max_concurrent_job_count_for_tool_user: 3
@@ -1863,6 +1866,9 @@ tools:
   toolshed.g2.bx.psu.edu/repos/iuc/kraken_biom/kraken_biom/.*:
     params:
       singularity_enabled: true
+  toolshed.g2.bx.psu.edu/repos/iuc/krakentools_.*:
+    params:
+      singularity_enabled: true
   toolshed.g2.bx.psu.edu/repos/iuc/krakentools_extract_kraken_reads/krakentools_extract_kraken_reads/.*:
     mem: 10
     params: