Update CDEPS component and remove DATM component

[binli2337]

PR Checklist

• Ths PR is up-to-date with the top of all sub-component repositories except for those sub-components which are the subject of this PR. Please consult the ufs-weather-model wiki if you are unsure how to do this.

• This PR has been tested using a branch which is up-to-date with the top of all sub-component repositories except for those sub-components which are the subject of this PR

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Description

The CDEPS component will be updated to include the latest changes from ESCOMP/CDEPS.
The DATM component will be removed and related scripts and configuration files will also be removed.

Issue(s) addressed

Link the issues to be closed with this PR, whether in this repository, or in another repository.
(Remember, issues must always be created before starting work on a PR branch!)

• fixes Remove DATM and related files #839
• fixes Update CDEPS component to the latest master branch of ESCOMP/CDEPS #844

Testing

How were these changes tested? What compilers / HPCs was it tested with? Are the changes covered by regression tests? (If not, why? Do new tests need to be added?) Have regression tests and unit tests (utests) been run? On which platforms and with which compilers? (Note that unit tests can only be run on tier-1 platforms)

• hera.intel
• hera.gnu
• orion.intel
• cheyenne.intel
• cheyenne.gnu
• gaea.intel
• jet.intel
• wcoss_cray
• wcoss_dell_p3
• CI: Skip due to DATM submodule related changes in CI

Dependencies

If testing this branch requires non-default branches in other repositories, list them. Those branches should have matching names (ideally).

Do PRs in upstream repositories need to be merged first?
If so add the "waiting for other repos" label and list the upstream PRs

• waiting on Update develop branch of cdeps to the most recent version of ESCOMP/CDEPS NOAA-EMC/CDEPS#37

[binli2337]

@junwang-noaa The code is ready.

[junwang-noaa]

I started RT on cray

…

On Fri, Oct 15, 2021 at 9:47 AM BinLi-NOAA ***@***.***> wrote: @junwang-noaa <https://github.com/junwang-noaa> The code is ready. — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#845 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AI7D6TPVJDHGHRGPZIFNBODUHAWHLANCNFSM5FE2I7QA> . Triage notifications on the go with GitHub Mobile for iOS <https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675> or Android <https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub>.

[DeniseWorthen]

There are still some remaining files w/ references to NEMSDatm: cmake/configure_apps.cmake and CMakeLists.txt.

I also think we need to clean up the NEMS/src/module_EARTH_GRID_component, which has both FRONT_NEMS_DATM and FRONT_CDEPS_DATM. This would have required a NEMS PR also.

[DeniseWorthen]

@binli2337 I've removed the run directory. It isn't actually necessary to delete them before re-running the auto-RT.

[binli2337]

@DeniseWorthen Thanks!

[BrianCurtis-NOAA]

Automated RT Failure Notification
Machine: cheyenne
Compiler: gnu
Job: RT
Repo location: /glade/scratch/dtcufsrt/autort/tests/auto/pr/747670691/20211015120014/ufs-weather-model
Please manually delete: /glade/scratch/dtcufsrt/FV3_RT/rt_69000
Test control_thompson_extdiag_debug 025 failed failed
Test control_thompson_extdiag_debug 025 failed in run_test failed
Test control_diag_debug 017 failed failed
Test control_diag_debug 017 failed in run_test failed
Please make changes and add the following label back:
cheyenne-gnu-RT

[DeniseWorthen]

The control_thompson_extdiag_debug failure on cheyenne was

77:mp_thompson_post_run: ttendlim applied 1/4064 times at timestep 1
144:
144:Program received signal SIGFPE: Floating-point exception - erroneous arithmetic operation.
144:
144:Backtrace for this error:
144:#0  0x2b697cd00aff in ???
144:#1  0x10b8723 in ???
144:#2  0x10b78a1 in ???
144:#3  0x10b62fa in ???

I'll try copying the run directory and try re-running.

The control_diag_debug was a time-out.

[junwang-noaa]

@binli2337 cray log file is at: /scratch1/NCEPDEV/stmp2/Jun.Wang/wcosslog/RegressionTests_wcoss_cray.log

[DeniseWorthen]

It looks like CDEPS has been updated, so once the submodule is reverted I will approve.

[climbfuji]

Nice cleanup work!