Tracks missing using capture overlay

[Rory235]

When I use the capture overlay option some tracks are missing. A different amount of tracks are missing every time. Screen shot below with missing tracks circled. I am using FIJI 1.54f

Work flow

Load track mate file --> Set tracks to display speed --> select capture overlay --> define slice I want to capture --> execute

[Rory235]

UPDATE: After a bit of testing. This only occurs when the track color is set to speed (not max speed but the speed under the edge features)

[tinevez]

This is very strange indeed. Could you share the file to reproduce the issue?

[Rory235]

Sure thing, do you just need the track mate file or the raw data as well? I can send it tomorrow when I am back in the office

…

________________________________ From: Jean-Yves Tinevez ***@***.***> Sent: 11 September 2024 19:03 To: trackmate-sc/TrackMate ***@***.***> Cc: Rory Brittain ***@***.***>; Author ***@***.***> Subject: Re: [trackmate-sc/TrackMate] Tracks missing using capture overlay (Issue #305) CAUTION: This email originated outside the University. Check before clicking links or attachments. This is very strange indeed. Could you share the file to reproduce the issue? — Reply to this email directly, view it on GitHub<#305 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/A3SHDZ267V3SS5PQDNPINVLZWCAVZAVCNFSM6AAAAABOAXXSGCVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDGNBUGM2DENJRHA>. You are receiving this because you authored the thread.Message ID: ***@***.***>

[Rory235]

How do I share the data @tinevez , sorry I am not to familiar with GitHub

[tinevez]

Sorry for the long delay @Rory235 . You can use email? Transfer system?

[Rory235]

Do you need the whole data set or just the Trackmate file?