Comprehensive design of CRISPR gRNAs for nucleases and base editors
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Updated
Jul 18, 2024 - R
Comprehensive design of CRISPR gRNAs for nucleases and base editors
A software tool for personalized and allele-specific CRISPR editing.
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.
A flexible and fast sgRNA counter from FASTQ Files
Visualization of CRISPR guide RNAs (gRNAs)
Useful human and mouse data for the crisprVerse ecosystem
Bowtie-based alignment of CRISPR gRNA spacer sequences
Pre-trained models for the crisprScore package
BWA-based alignment of CRISPR gRNA spacer sequences
UNDER CONSTRUCTION: CRISPR sgRNA quantification pipeline
Script used to cdesign sgRNA sequences based on desired input parameters comparing different web-based tools
predicting sgRNA mismatch activity using keras
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