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Error in if (relative_cooccurence >= minimum_relative_cooccurence) { : missing value where TRUE/FALSE needed #7

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anslan opened this issue Apr 17, 2020 · 1 comment

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@anslan
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anslan commented Apr 17, 2020

Dear Tobias,

lulu has worked fine for most of my data, but now I received an error, where adjusting the lulu parameters did not help. --> "Error in if (relative_cooccurence >= minimum_relative_cooccurence) { : missing value where TRUE/FALSE needed"
Any idea how to fix this?
image

Thanks,
Sten

@anslan
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anslan commented Apr 18, 2020

Oh, input OTU table simply contained OTUs with 0 seqs. Removing these OTUs resolved the issue.

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