Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Error in if (relative_cooccurence >= minimum_relative_cooccurence) { : missing value where TRUE/FALSE needed #16

Open
panstrongylus opened this issue Aug 23, 2022 · 1 comment
Open

Error in if (relative_cooccurence >= minimum_relative_cooccurence) { : missing value where TRUE/FALSE needed #16

panstrongylus opened this issue Aug 23, 2022 · 1 comment

Comments

@panstrongylus
Copy link

Hi Tobias et al.

Running Lulu in Mjolnir wrapper - I have an error code

Error in if (relative_cooccurence >= minimum_relative_cooccurence) { :
missing value where TRUE/FALSE needed

A closed thread (#7) mentioned that this is due to an OTU with a zero value as a total in the dataset - but examination of the OTU table does not indicate any such instances

I wonder if you might have any advice ?

Many thanks

Martin
@panstrongylus
Copy link
Author

Fixed it - lib name and sample prefix were different - thanks

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@panstrongylus