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Bioconductor 3.20

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@lazappi lazappi released this 21 Nov 16:38
· 7 commits to devel since this release

Major changes

  • Add environment for anndata v0.10.9. This is now the default environment for the Python reader/writer

Minor changes

  • Avoid deprecation warning due to setting dtype when creating Python AnnData objects
  • Standardise code styling using {styler}
  • Add test using the more complete example H5AD file

Bug fixes

  • Correctly assign levels to factors in R reader with anndata v0.7 files (Fixes #122)
  • Correctly set filepath in the R reader with reading adata.raw with use_hdf5 = TRUE (PR #124 @GabrielHoffman, Fixes #123)

Full Changelog: v1.14.0...v1.16.0