12S Vertebrate North American Classifier v3.0.0-ref

Contains the files used to train the classifier, provided for reference only.

12S Vertebrate North American Classifier v3.0.0

Contains the files ready to be used with the RDP Classifier.

12S Vertebrate Classifier v2.0.0-ref

These were the files originally used to train the classifier. For reference only. Contains a FASTA file with sequences and a taxonomy file.

12S Vertebrate Classifier v2.0.0

Based on NCBI nucleotide sequences [July 2021]. Updated to include 12S sequences from MitoFish [March 2020]. These files are ready to be used directly with the RDP Classifier v2.13 .

12S Vertebrate Classifier v1.0.0-ref

These were the files originally used to train the classifier. For reference only. Contains a FASTA file with sequences and a taxonomy file.

12S Vertebrate Classifier v1.0.0

Based on NCBI nucleotide sequences, accessed July 2021. Only includes sequences 500bp+, with no ambiguous characters. Only includes records identified to species rank--does not contain sp., aff., cf. or numbers or more than 2 words. Includes non-vertebrate outgroup sequences. Checked for the presence of human or non-vertebrate misannotated contaminants. These files are ready to be used directly with the RDP Classifier v2.13