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TG2-VALIDATION_PHYLUM_FOUND #22

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iDigBioBot opened this issue Jan 5, 2018 · 3 comments
Open

TG2-VALIDATION_PHYLUM_FOUND #22

iDigBioBot opened this issue Jan 5, 2018 · 3 comments
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Conformance CORE TG2 CORE tests NAME Parameterized Test requires a parameter Test Tests created by TG2, either CORE, Supplementary or DO NOT IMPLEMENT TG2 Validation VOCABULARY

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@iDigBioBot
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iDigBioBot commented Jan 5, 2018

TestField Value
GUID eaad41c5-1d46-4917-a08b-4fd1d7ff5c0f
Label VALIDATION_PHYLUM_FOUND
Description Does the value of dwc:phylum occur at rank of Phylum in the bdq:sourceAuthority?
TestType Validation
Darwin Core Class dwc:Taxon
Information Elements ActedUpon dwc:phylum
Information Elements Consulted
Expected Response EXTERNAL_PREREQUISITES_NOT_MET if the bdq:sourceAuthority is not available; INTERNAL_PREREQUISITES_NOT_MET if dwc:phylum is bdq:Empty; COMPLIANT if the value of dwc:phylum is found as a value at the rank of Phylum in the bdq:sourceAuthority; otherwise NOT_COMPLIANT
Data Quality Dimension Conformance
Term-Actions PHYLUM_FOUND
Parameter(s) bdq:sourceAuthority
Source Authority bdq:sourceAuthority default = "GBIF Backbone Taxonomy" {[https://doi.org/10.15468/39omei]} {API endpoint [https://api.gbif.org/v1/species?datasetKey=d7dddbf4-2cf0-4f39-9b2a-bb099caae36c&name=]}
Specification Last Updated 2022-03-25
Examples [dwc:phylum="Tracheophyta": Response.status=RUN_HAS_RESULT, Response.result=COMPLIANT, Response.comment="dwc:phylum has an equivalent at the rank of Phylum in the bdq:sourceAuthority. GBIF.org uses Trachyophyta for the Phylum including ferns"]
[dwc:phylum="Trachyophyta": Response.status=RUN_HAS_RESULT, Response.result=NOT_COMPLIANT, Response.comment="dwc:phylum does not have an equivalent at the rank of Phylum in the bdq:sourceAuthority."]
Source iDigBio
References
Example Implementations (Mechanisms) Kurator/FilteredPush sci_name_qc Library
Link to Specification Source Code https://github.com/FilteredPush/sci_name_qc/blob/v1.1.2/src/main/java/org/filteredpush/qc/sciname/DwCSciNameDQ.java#L134
Notes The purpose of this test is to check whether the value is a name that is a result of a nomenclatural act at this rank. This excludes unpublished names, misspellings and vernacular names. It is expected that the test will designate the source authority against to check. The same test might return distinct results when using distinct source authorities.
@tucotuco tucotuco changed the title TG2-VALIDATION_PHYLUM_NOTSTANDARD TG2-VALIDATION_PHYLUM_NOTFOUND Jan 18, 2018
@ArthurChapman ArthurChapman added the Test Tests created by TG2, either CORE, Supplementary or DO NOT IMPLEMENT label Jan 18, 2018
@tucotuco tucotuco added the Parameterized Test requires a parameter label Nov 5, 2018
ArthurChapman added a commit that referenced this issue Oct 6, 2020
In accord with #189 added tests data filr for PHYLUM_NOTFOUND #22
@Tasilee Tasilee changed the title TG2-VALIDATION_PHYLUM_NOTFOUND TG2-VALIDATION_PHYLUM_FOUND Mar 22, 2022
@chicoreus
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Corrected typo in description s/gphylum/phylum/ "Does the value of dwc:gphylum occur at rank of Phylum in bdq:sourceAuthority?"

chicoreus added a commit to FilteredPush/sci_name_qc that referenced this issue Jun 26, 2023
…tdwg/bdq specifications. Updated metadata (added ProvidesVersion and Specification) for tdwg/bdq#81 VALIDATION_KINGDOM_FOUND and tdwg/bdq#22 VALIDATION_PHYLUM_FOUND.  Updated metadata, no changes to specifications.
@Tasilee
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Tasilee commented Jul 4, 2023

Amended Source Authority values to align with @chicoreus syntax

From

bdq:sourceAuthority default = "GBIF Backbone Taxonomy" [https://doi.org/10.15468/39omei] |
| | API endpoint [https://api.gbif.org/v1/species?datasetKey=d7dddbf4-2cf0-4f39-9b2a-bb099caae36c&name=]

to

bdq:sourceAuthority default = "GBIF Backbone Taxonomy" {[https://doi.org/10.15468/39omei]} {API endpoint [https://api.gbif.org/v1/species?datasetKey=d7dddbf4-2cf0-4f39-9b2a-bb099caae36c&name=]}

@Tasilee
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Tasilee commented Sep 16, 2023

Splitting bdqffdq:Information Elements into "Information Elements ActedUpon" and "Information Elements Consulted"

@chicoreus chicoreus added the CORE TG2 CORE tests label Sep 18, 2023
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