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Generate np chunks for caching #125
base: divya/remove-randomcrop-aug
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Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## divya/remove-randomcrop-aug #125 +/- ##
===============================================================
- Coverage 97.51% 97.35% -0.16%
===============================================================
Files 39 39
Lines 3986 4049 +63
===============================================================
+ Hits 3887 3942 +55
- Misses 99 107 +8 ☔ View full report in Codecov by Sentry. |
This PR adds an option to cache samples to disk as
.npz
files, apart from the in-memory caching available with torch Dataset pipeline in sleap-nn. These.npz
files stores dictionaries with preprocessed images and keypoints extracted from the.slp
file. In theDataset.__getitem__()
method, we apply augmentation, and generate confidence maps (and part affinity fields for bottom-up model) to ensure randomness. The.npz
dir is then deleted at the end of training.Example: