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Bump to 1.5.0, and update news and descriptions
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@talgalili
talgalili committed Oct 6, 2023
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271 changes: 271 additions & 0 deletions ChangeLog
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* 2023-09-07(Alan O'Callaghan) R cmd check notes |aa2e2bb|
| .Rbuildignore | 1 +
| R/heatmaply.R | 1 +
| README.md | 21 +++++++++++++--------
| inst/CITATION | 8 +++-----
| man/heatmaply.Rd | 6 +++++-
| 5 files changed, 23 insertions(+), 14 deletions(-)

* 2023-09-07(Alan O'Callaghan) Resolve #295 |17c5526|
| DESCRIPTION | 2 +-
| NEWS | 1 +
| R/heatmaply.R | 54 +++++++++++++++++++++++++++++-------------------------
| R/plots.R | 23 +++++++++++++----------
| 4 files changed, 44 insertions(+), 36 deletions(-)

* 2023-07-20(Alan O'Callaghan) Avoid expensive transpose |817b566|
| R/heatmapr.R | 15 ++++++++-------
| 1 file changed, 8 insertions(+), 7 deletions(-)

* 2023-07-11(Alan O'Callaghan) Remove old docs |71458a2|
| docs/articles/heatmaply.html | 52 +-
| .../crosstalk-1.0.0/css/crosstalk.css | 27 -
| .../crosstalk-1.0.0/js/crosstalk.js | 1471 ---
| .../crosstalk-1.0.0/js/crosstalk.js.map | 37 -
| .../crosstalk-1.0.0/js/crosstalk.min.js | 2 -
| .../crosstalk-1.0.0/js/crosstalk.min.js.map | 1 -
| .../crosstalk-1.1.1/css/crosstalk.css | 27 -
| .../crosstalk-1.1.1/js/crosstalk.js | 1474 ---
| .../crosstalk-1.1.1/js/crosstalk.js.map | 37 -
| .../crosstalk-1.1.1/js/crosstalk.min.js | 2 -
| .../crosstalk-1.1.1/js/crosstalk.min.js.map | 1 -
| .../figure-html/unnamed-chunk-20-1.png | Bin 10157 -> 0 bytes
| .../figure-html/unnamed-chunk-23-1.png | Bin 9430 -> 0 bytes
| .../htmlwidgets-1.3/htmlwidgets.js | 839 --
| .../htmlwidgets-1.5.1/htmlwidgets.js | 903 --
| .../htmlwidgets-1.5.3/htmlwidgets.js | 903 --
| .../jquery-1.11.3/jquery-AUTHORS.txt | 217 -
| .../heatmaply_files/jquery-1.11.3/jquery.js | 10351 -----------------
| .../heatmaply_files/jquery-1.11.3/jquery.min.js | 5 -
| .../heatmaply_files/jquery-1.11.3/jquery.min.map | 1 -
| .../jquery-3.5.1/jquery-AUTHORS.txt | 357 -
| .../heatmaply_files/jquery-3.5.1/jquery.js | 10872 ------------------
| .../heatmaply_files/jquery-3.5.1/jquery.min.js | 2 -
| .../heatmaply_files/jquery-3.5.1/jquery.min.map | 1 -
| .../plotly-binding-4.9.0/plotly.js | 931 --
| .../plotly-binding-4.9.1/plotly.js | 935 --
| .../plotly-binding-4.9.3/plotly.js | 935 --
| .../plotly-htmlwidgets.css | 9 -
| .../plotly-htmlwidgets.css | 9 -
| .../plotly-htmlwidgets.css | 9 -
| .../plotly-main-1.46.1/plotly-latest.min.js | 7 -
| .../plotly-main-1.49.4/plotly-latest.min.js | 7 -
| .../plotly-main-1.57.1/plotly-latest.min.js | 61 -
| docs/pkgdown.yml | 2 +-
| docs/reference/RColorBrewer_colors-1.png | Bin 54380 -> 0 bytes
| docs/reference/RColorBrewer_colors-2.png | Bin 74571 -> 0 bytes
| docs/reference/heatmaply-1.png | Bin 75746 -> 0 bytes
| docs/reference/heatmaply.html | 11 +-
| docs/reference/heatmaply_iris.html | 23 -
| docs/reference/heatmaply_iris.png | Bin 39646 -> 0 bytes
| .../crosstalk-1.0.0/css/crosstalk.css | 27 -
| .../crosstalk-1.0.0/js/crosstalk.js | 1471 ---
| .../crosstalk-1.0.0/js/crosstalk.js.map | 37 -
| .../crosstalk-1.0.0/js/crosstalk.min.js | 2 -
| .../crosstalk-1.0.0/js/crosstalk.min.js.map | 1 -
| .../htmlwidgets-1.5.1/htmlwidgets.js | 903 --
| .../jquery-1.11.3/jquery-AUTHORS.txt | 217 -
| .../heatmaply_iris_files/jquery-1.11.3/jquery.js | 10351 -----------------
| .../jquery-1.11.3/jquery.min.js | 5 -
| .../jquery-1.11.3/jquery.min.map | 1 -
| .../plotly-binding-4.9.1/plotly.js | 935 --
| .../plotly-htmlwidgets.css | 9 -
| .../plotly-main-1.49.4/plotly-latest.min.js | 7 -
| .../typedarray-0.1/typedarray.min.js | 1 -
| docs/sitemap.xml | 3 -
| 55 files changed, 35 insertions(+), 44456 deletions(-)

* 2023-07-11(Alan O'Callaghan) Document |f8c4bbb|
| .Rbuildignore | 1 +
| NEWS | 2 +-
| R/heatmaply.R | 8 +++++---
| man/heatmaply.Rd | 11 ++++++++---
| 4 files changed, 15 insertions(+), 7 deletions(-)

* 2023-07-11(Alan O'Callaghan) Update pkgdown |6f67dcd|
| docs/404.html | 4 +-
| docs/CONDUCT.html | 5 +-
| docs/articles/heatmaply.html | 883 +++++------
| .../crosstalk-1.2.0/css/crosstalk.min.css | 1 +
| .../crosstalk-1.2.0/js/crosstalk.js | 1474 +++++++++++++++++++
| .../crosstalk-1.2.0/js/crosstalk.js.map | 37 +
| .../crosstalk-1.2.0/js/crosstalk.min.js | 2 +
| .../crosstalk-1.2.0/js/crosstalk.min.js.map | 1 +
| .../crosstalk-1.2.0/scss/crosstalk.scss | 75 +
| .../figure-html/unnamed-chunk-21-1.png | Bin 23280 -> 28473 bytes
| .../figure-html/unnamed-chunk-24-1.png | Bin 19635 -> 25759 bytes
| .../figure-html/unnamed-chunk-29-1.png | Bin 78976 -> 89695 bytes
| .../htmlwidgets-1.6.2/htmlwidgets.js | 901 ++++++++++++
| .../plotly-binding-4.10.2/plotly.js | 941 ++++++++++++
| .../plotly-htmlwidgets.css | 9 +
| .../plotly-main-2.11.1/plotly-latest.min.js | 69 +
| docs/articles/index.html | 109 +-
| docs/authors.html | 4 +-
| docs/index.html | 53 +-
| docs/news/index.html | 1128 +++++---------
| docs/pkgdown.css | 83 +-
| docs/pkgdown.js | 4 +-
| docs/pkgdown.yml | 6 +-
| docs/reference/RColorBrewer_colors.html | 324 ++--
| docs/reference/Rplot002.png | Bin 35438 -> 40671 bytes
| docs/reference/ggheatmap-1.png | Bin 131761 -> 136603 bytes
| docs/reference/ggheatmap.html | 188 +--
| docs/reference/ggplot_side_color_plot.html | 218 +--
| docs/reference/heatmaply.html | 1468 +++++++++---------
| docs/reference/heatmapr.html | 628 ++++----
| docs/reference/index.html | 172 +--
| docs/reference/is.heatmapr.html | 134 +-
| docs/reference/is.na10.html | 202 +--
| docs/reference/is.plotly.html | 134 +-
| docs/reference/normalize.html | 196 +--
| docs/reference/percentize.html | 196 +--
| docs/sitemap.xml | 60 +
| 37 files changed, 6008 insertions(+), 3701 deletions(-)

* 2023-07-11(Alan O'Callaghan) Update news/desc |039dc56|
| DESCRIPTION | 2 +-
| NEWS | 4 +++-
| 2 files changed, 4 insertions(+), 2 deletions(-)

* 2023-07-11(cole-johanson) Adds height/width arguments to plotly methods (#282) |b7d9b66|
| R/heatmaply.R | 36 ++++++++++++++++++++++++------------
| R/plots.R | 9 +++++++--
| 2 files changed, 31 insertions(+), 14 deletions(-)

* 2023-07-11(Alan O'Callaghan) Bugfix in scaling fun |a808467|
| NEWS | 2 +-
| R/heatmapr.R | 2 +-
| R/plots.R | 2 +-
| 3 files changed, 3 insertions(+), 3 deletions(-)

* 2023-07-11(Alan O'Callaghan) #292 |c94b17f|
| DESCRIPTION | 4 ++--
| NEWS | 6 ++++++
| R/heatmapr.R | 15 +++++++++++----
| 3 files changed, 19 insertions(+), 6 deletions(-)

* 2023-07-11(Alan O'Callaghan) Revert "#292" |b5295ba|
| DESCRIPTION | 4 ++--
| NEWS | 15 ---------------
| R/heatmapr.R | 15 ++++-----------
| R/plots.R | 46 +++++-----------------------------------------
| 4 files changed, 11 insertions(+), 69 deletions(-)

* 2023-07-11(Alan O'Callaghan) Doc |7142a74|
| DESCRIPTION | 2 +-
| man/heatmaply.Rd | 3 +--
| man/heatmapr.Rd | 3 +--
| 3 files changed, 3 insertions(+), 5 deletions(-)

* 2023-07-11(Alan O'Callaghan) Merge branch 'master' of github.com:talgalili/heatmaply |d26488b
|\
| * 2023-03-22(Alan O'Callaghan) Use local heatmaply for pkgdown |c44dde0| |
| | .github/workflows/pkgdown.yaml | 2 +-
| | 1 file changed, 1 insertion(+), 1 deletion(-)

| * 2023-03-22(Alan O'Callaghan) Spec R deps for pkgdown |df73096| |
| | .github/workflows/pkgdown.yaml | 2 +-
| | 1 file changed, 1 insertion(+), 1 deletion(-)

| * 2023-03-22(Alan O'Callaghan) Bump another version |c5ef909| |
| | .github/workflows/pkgdown.yaml | 2 +-
| | 1 file changed, 1 insertion(+), 1 deletion(-)

| * 2023-03-22(Alan O'Callaghan) Bump GHA versions |1d8713a| |
| | .github/workflows/check-release.yaml | 6 +++---
| | .github/workflows/check-standard.yaml | 8 ++++----
| | .github/workflows/lint.yaml | 4 ++--
| | .github/workflows/pkgdown.yaml | 4 ++--
| | .github/workflows/test-coverage.yaml | 4 ++--
| | 5 files changed, 13 insertions(+), 13 deletions(-)

| * 2023-03-22(Alan O'Callaghan) Merge branch 'master' of github.com:talgalili/heatmaply |95f9ac4
| |\
| * | 2023-03-22(Alan O'Callaghan) Fix behaviour when limits don't contain the data range |b8e1219| | |
| | | DESCRIPTION | 4 ++--
| | | NEWS | 8 ++++++++
| | | R/heatmaply.R | 39 +++++++++++++++++++++------------------
| | | R/plots.R | 34 +++++++++++++---------------------
| | | 4 files changed, 44 insertions(+), 41 deletions(-)

* | | 2023-07-11(Alan O'Callaghan) #292 |17dfbac
| |/
|/| | |
| | DESCRIPTION | 4 ++--
| | NEWS | 6 ++++++
| | R/heatmapr.R | 15 +++++++++++----
| | 3 files changed, 19 insertions(+), 6 deletions(-)

* | 2023-01-06(Alan O'Callaghan) Correct date |73bfa04| |
| | DESCRIPTION | 2 +-
| | NEWS | 2 +-
| | 2 files changed, 2 insertions(+), 2 deletions(-)

* | 2023-01-06(Alan O'Callaghan) Resolve issue flagged in #266 |f663ea6
|/ |
| DESCRIPTION | 4 ++--
| NEWS | 7 ++++++-
| R/plots.R | 5 ++---
| 3 files changed, 10 insertions(+), 6 deletions(-)

* 2022-11-12(Tal Galili) add props |a978eb6|
| NEWS | 2 +-
| 1 file changed, 1 insertion(+), 1 deletion(-)

* 2022-11-12(Tal Galili) Fix "keep annotation names without adding dots" issue #281 |133d2df|
| DESCRIPTION | 4 ++--
| NEWS | 8 ++++++++
| R/heatmaply.R | 4 ++--
| 3 files changed, 12 insertions(+), 4 deletions(-)

* 2022-10-08(Tal Galili) trying another url that CRAN might like. |4a6b920|
| vignettes/heatmaply.Rmd | 2 +-
| 1 file changed, 1 insertion(+), 1 deletion(-)

* 2022-10-08(Tal Galili) simplify github action using the latest usethis package (2.1.6) |8015d41|
| .github/workflows/R-CMD-check.yaml | 111 +++++++----------------------------
| .github/workflows/pr-commands.yaml | 28 +++++----
| 2 files changed, 38 insertions(+), 101 deletions(-)

* 2022-10-08(Tal Galili) Fix for CRAN release: 1. bad url 2. unneeded text in NEWS |bb80cd7|
| NEWS | 56 -----------------------------------------------
| NEWS.md | 56 -----------------------------------------------
| README.md | 2 +-
| vignettes/heatmaply.Rmd | 2 +-
| 4 files changed, 2 insertions(+), 114 deletions(-)

* 2022-10-08(Tal Galili) attempt to fix missing curl package for windows run |bf1015d|
| .github/workflows/R-CMD-check.yaml | 1 +
| 1 file changed, 1 insertion(+)

* 2022-10-08(Tal Galili) update homepage re-roder banners in README |d888d8d|
| README.md | 8 ++++----
| docs/index.html | 6 +++---
| 2 files changed, 7 insertions(+), 7 deletions(-)

* 2022-10-08(Tal Galili) Update README.md (and misc .Rd updates) |260c186|
| README.md | 10 ++---
| man/RColorBrewer_colors.Rd | 19 +++++----
| man/heatmaply.Rd | 98 ++++++++++++++++++++++++++------------------
| man/heatmapr.Rd | 4 +-
| man/is.na10.Rd | 19 +++++----
| man/normalize.Rd | 3 +-
| man/percentize.Rd | 3 +-
| 7 files changed, 89 insertions(+), 67 deletions(-)

* 2022-10-08(Tal Galili) Add details to the new bug fix. |7f10968|
| NEWS | 8 +++++++-
| NEWS.md | 8 +++++++-
| 2 files changed, 14 insertions(+), 2 deletions(-)

* 2022-10-08(Tal Galili) Refresh DESCRIPTION and NEWS docs before release |5d2fad4|
| ChangeLog | 160 +++++++++++++++++++++++++++++++
| DESCRIPTION | 4 +-
| NEWS | 12 +--
| NEWS.md | 13 ++-
| docs/404.html | 117 +++++++----------------
| docs/CONDUCT.html | 109 ++++-----------------
| docs/authors.html | 164 ++++++++++----------------------
| docs/index.html | 265 ++++++++++++++++++++++++++--------------------------
| 8 files changed, 416 insertions(+), 428 deletions(-)

* 2022-10-08(Tal Galili) Merge pull request #279 from talgalili/cellnote-hoverinfo |8d5dc75
|\
| * 2022-10-03(Alan O'Callaghan) Add k_col/row tests |fcc35c7| |
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4 changes: 2 additions & 2 deletions DESCRIPTION
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Package: heatmaply
Type: Package
Title: Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'
Version: 1.4.3
Date: 2023-09-07
Version: 1.5.0
Date: 2023-10-06
Authors@R: c(
person("Tal", "Galili", role = c("aut", "cre", "cph"), email = "[email protected]", comment = "https://www.r-statistics.com"),
person("Alan", "O'Callaghan", comment = "https://github.com/Alanocallaghan",role = "aut"),
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9 changes: 5 additions & 4 deletions NEWS
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heatmaply 1.4.3 (2023-07-11)
heatmaply 1.5.0 (2023-10-06)
===============
## NEW FEATURE
- heatmaply: Add `plotly_source` argument for handling multiple heatmaply instances in a shiny page (see #295)
- heatmaply: add `width` and `height` arguments to the plotly method, it now control the size of the output plots, to some extent at least.

## OTHER NOTES

- `width` and `height` arguments now control the size of the output plots, to some extent at least.
- Improved error message when using `scale` argument with zero variance rows/columns.
- Add `plotly_source` argument for handling multiple heatmaply instances in a shiny page (see #295)
- Fix misc CRAN notes.

heatmaply 1.4.2 (2023-01-06)
===============
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23 changes: 23 additions & 0 deletions NEWS.md
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heatmaply 1.5.0 (2023-10-06)
===============
## NEW FEATURE
- heatmaply: Add `plotly_source` argument for handling multiple heatmaply instances in a shiny page (see #295)
- heatmaply: add `width` and `height` arguments to the plotly method, it now control the size of the output plots, to some extent at least.

## OTHER NOTES
- Improved error message when using `scale` argument with zero variance rows/columns.
- Fix misc CRAN notes.

heatmaply 1.4.2 (2023-01-06)
===============

## BUGFIX
- Fix transpose issue when using scatter mode with `plot_method="plotly"`.


heatmaply 1.4.1 (2022-11-12)
===============

## BUGFIX
- Fix "keep annotation names without adding dots" issue #281. Props to @colejohanson.

heatmaply 1.4.0 (2022-10-08)
===============
## OTHER NOTES
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