FIX: CODECOV Setup

syedhamidali · Oct 13, 2024 · 8fa2eaa · 8fa2eaa
1 parent af08e77
commit 8fa2eaa
Showing 1 changed file with 16 additions and 17 deletions.
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -48,7 +48,7 @@ jobs:
       with:
         fetch-depth: 0
     - name: Install micromamba environment
-      uses: mamba-org/setup-micromamba@v1
+      uses: mamba-org/setup-micromamba@v2
       with:
           environment-name: radarx-unit-tests
           environment-file: ${{env.CONDA_ENV_FILE}}
@@ -61,27 +61,25 @@ jobs:
 
     - name: Install coverage via pip   # ADD THIS STEP TO INSTALL COVERAGE
       run: |
-        python -m pip install coverage
-        python -m pip install pytest-cov
-        python -m pip install pytest-xdist
-
+        python -m pip install coverage pytest-cov pytest-xdist
     - name: Install radarx
       run: |
         python -m pip install . --no-deps
     - name: Version Info
       run: |
         python -c "import radarx; print(radarx.version.version)"
-    - name: Test with pytest and collect coverage
+    - name: Test with pytest
       run: |
-        pytest -n auto --dist loadfile --verbose --durations=15 --cov=radarx --cov-report=xml --cov-report=term-missing tests/ > coverage_unit.xml
+        pytest -n auto --dist loadfile --verbose --durations=15 --cov-report xml:coverage_unit.xml --cov=radarx --pyargs tests
     - name: Upload coverage to Codecov
       uses: codecov/codecov-action@v4
       with:
-        files: coverage_unit.xml
+        file: ./coverage_unit.xml
         flags: unittests
+        env_vars: RUNNER_OS,PYTHON_VERSION
         name: codecov-gha
         fail_ci_if_error: false
-        token: ${{ secrets.CODECOV_TOKEN }}
+        token: ${{ secrets.CODECOV_TOKEN}}
 
   build_1:
     name: radarx notebook tests - linux
@@ -102,7 +100,7 @@ jobs:
       with:
         fetch-depth: 0
     - name: Install micromamba environment
-      uses: mamba-org/setup-micromamba@v1
+      uses: mamba-org/setup-micromamba@v2
       with:
           environment-name: radarx-notebook-tests
           environment-file: ${{env.CONDA_ENV_FILE}}
@@ -112,26 +110,27 @@ jobs:
               python=${{matrix.python-version}}
               numpy=${{matrix.numpy-version}}
               conda
+    - name: Install coverage and pytest via pip
+      run: |
+        python -m pip install coverage pytest-cov pytest-xdist nbval
     - name: Install radarx
       run: |
         python -m pip install . --no-deps
     - name: Version Info
       run: |
         python -c "import radarx; print(radarx.version.version)"
-    # - name: Test with pytest
-    #   run: |
-    #     pytest -n auto --dist loadfile --verbose --durations=15 --cov-report xml:coverage_notebook.xml --cov=radarx --pyargs examples/notebooks
-    - name: Test with pytest and collect coverage
+    - name: Test with pytest
       run: |
-        pytest --nbval --verbose --durations=15 --cov=radarx --cov-report=xml --cov-report=term-missing examples/notebooks > coverage_notebook.xml
+        pytest --nbval --verbose --durations=15 --cov=radarx --cov-report=xml:coverage_notebook.xml --cov-report=term-missing examples/notebooks
     - name: Upload coverage to Codecov
       uses: codecov/codecov-action@v4
       with:
-        files: coverage_notebook.xml
+        file: ./coverage_notebook.xml
         flags: notebooktests
+        env_vars: RUNNER_OS,PYTHON_VERSION
         name: codecov-gha
         fail_ci_if_error: false
-        token: ${{ secrets.CODECOV_TOKEN }}
+        token: ${{ secrets.CODECOV_TOKEN}}
 
   test_build_distribution_testpypi:
     name: test build distribution for testpypi