Noise (#38)

* Initial port of NoiseLevelEstimation to function-level * Replaced NoiseLevelEstimation class and associated tests with function equivalents. * Declassed NoiseLevelEstimation routines and provided appropriate tests * Addressed PEP8 errors * Added changelog * Fixed __main__ in test_noise.py and added comments to noise.py * Declassed NoiseLevelEstimation and added appropriate tests. Updated master branch and recommiting to solve merge conflicts * Output of noise estimation function is now a dictionary. Added DOIs for references. Other small changes. No changes to algorithms themselves, as was suggested by @dpshelio * added reduce cr example * fixed tox * Fixed deps * renamed example file * ran linters * Apply suggestions from code review Co-Authored-By: Nabil Freij <[email protected]> * added few links * fixed docs build * Apply suggestions from code review Co-Authored-By: Nabil Freij <[email protected]> * Apply suggestions from code review Co-Authored-By: Nabil Freij <[email protected]> * Added note for jp2 * removed jp2 * changed parameters for better results * added parameter docs * deleted few lines * Apply suggestions from code review Co-Authored-By: Nabil Freij <[email protected]> * Update examples/remove_CR_hits.py Co-Authored-By: Nabil Freij <[email protected]> * fixed comments on the previous PR * fixed pytest * changelog and pep * docs and linters
sunpy · Aug 21, 2019 · fbf6a19 · fbf6a19
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diff --git a/changelog/38.trivial.rst b/changelog/38.trivial.rst
@@ -0,0 +1 @@
+Transferred sunkit_image.utils.noise.NoiseLevelEstimation from class object into a series of functions.
diff --git a/examples/remove_CR_hits.py b/examples/remove_CR_hits.py
@@ -58,7 +58,9 @@
 # to clean the high intensity bright cosmic ray hits.
 # We also modify the ``readnoise`` parameter to obtain better results.
 
-mask, clean_data = astroscrappy.detect_cosmics(lasco_map.data, sigclip=2, objlim=2, readnoise=4, verbose=True)
+mask, clean_data = astroscrappy.detect_cosmics(
+    lasco_map.data, sigclip=2, objlim=2, readnoise=4, verbose=True
+)
 # This returns two variables - mask is a boolean array depicting whether there is
 # a cosmic ray hit at that pixel, clean_data is the cleaned image after removing those
 # hits.

diff --git a/setup.cfg b/setup.cfg
@@ -20,6 +20,7 @@ install_requires =
 
 [options.extras_require]
 tests =
+  pytest<5.1
   pytest-astropy
   pytest-cov
   tox
Original file line number	Diff line number	Diff line change
		@@ -0,0 +1 @@
		Transferred sunkit_image.utils.noise.NoiseLevelEstimation from class object into a series of functions.