Fix recent merge conflict #1
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| name: libcootapi CI Ubuntu | |
| on: | |
| push: | |
| jobs: | |
| build-libcootapi-for-ubuntu: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Cache chapi dependencies | |
| id: Cache-chapi-dependencies-using-python-3-10 | |
| uses: actions/cache@v4 | |
| with: | |
| path: /home/runner/install/chapi-Linux-ubuntu-gtk4 | |
| key: chapi-deps-ubuntu-using-python-3-10 | |
| - name: Cache test data | |
| id: Cache-test-data | |
| uses: actions/cache@v4 | |
| with: | |
| path: test-molecule-container-test-data.tar.gz | |
| key: chapi-build-ubuntu-cache-test-data | |
| - name: download test data | |
| run: wget -N -nv https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/data/test-molecule-container-test-data.tar.gz | |
| - name: untar test data | |
| run: mkdir test-data && cd test-data && tar xvf ../test-molecule-container-test-data.tar.gz | |
| - name: Cache gemmi build | |
| id: Cache-gemmi-build | |
| uses: actions/cache@v4 | |
| with: | |
| path: build-gemmi | |
| key: chapi-build-ubuntu-gemmi-cache-build | |
| - name: Install system dependencies | |
| run: sudo apt-get install cmake libdw-dev libncurses5-dev libgtk-4-dev | |
| - name: Where are we? | |
| run: pwd | |
| - name: Run build-with-build-it-3-3 | |
| env: | |
| CHAPI_ONLY: true | |
| run: bash build-it-3-3 || echo done | |
| - name: create-build-directory-for-libcootapi | |
| run: mkdir build-libcootapi | |
| - name: set the path | |
| run: echo /home/runner/install/chapi-Linux-ubuntu-gtk4/bin >> $GITHUB_PATH | |
| - name: run cmake | |
| run: > | |
| cd build-libcootapi && | |
| cmake -DCMAKE_INSTALL_PREFIX=/home/runner/install/chapi-Linux-ubuntu-gtk4 | |
| -Dnanobind_DIR=/home/runner/install/chapi-Linux-ubuntu-gtk4/lib/python3.10/site-packages/nanobind/cmake .. | |
| - name: make | |
| run: cd build-libcootapi && make -j 4 | |
| - name: make install | |
| run: cd build-libcootapi && make install | |
| - name: test chapi | |
| run: which python3 && python3 --version | |
| - name: what site-packages files do we have? | |
| run: find /home/runner/install/chapi-Linux-ubuntu-gtk4/lib/python3.10/site-packages | |
| - name: check linking 1 | |
| run: ldd /home/runner/install/chapi-Linux-ubuntu-gtk4/lib/python3.10/site-packages/chapi.cpython-310-x86_64-linux-gnu.so | |
| - name: test with chapi-using script | |
| run: which python3 && cat python-tests/test_chapi2.py && python3 python-tests/test_chapi2.py | |
| - name: where are we? | |
| run: pwd && ls -lt | |
| - name: make test-molecules-container | |
| run: cd build-libcootapi && make test-molecules-container | |
| - name: run the test-molecules-container test | |
| # this needs the monomer library | |
| env: | |
| MOORHEN_TEST_DATA_DIR: ../test-data | |
| run: cd build-libcootapi && echo ./test-molecules-container |