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MOPline-v1.8.2
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@stat-lab stat-lab released this 03 Aug 08:33
· 88 commits to main since this release
v1.8.2
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Learn about vigilant mode.

(1) Scripts for creating gap bed and STR/SimpleRepeat files were added.
(2) The codes for run_CNVnator.pl, run_inGAP.pl, run_single.pl, run_batch_slurm.pl, run_batch_LSF.pl, run_single_singularity.pl, run_batch_slurm_singularity.pl, and run_batch_LSF_singularity.pl were fixed to fit a wide range of non-human species.
(3) Singularity definition file was corrected to decrease the file size of created sif file.
(4) A direct download method for the Singularity sif file was provided.
(5) A bug in scripts/run_SVcallers/run_MELT.pl was fixed: the melt_target default option for human (specified with -mt) was specified as 'ALU,LINE1,SVA,HERVK'.

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