Upgrade Deno version (#126)

* Upgraded version. * Removed deprecated --------- Co-authored-by: Nigel Leck <[email protected]>
stSoftwareAU · Aug 8, 2023 · 4ebba71 · 4ebba71
1 parent f29ae98
commit 4ebba71
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Showing 42 changed files with 61 additions and 57 deletions.
diff --git a/src/Neat.ts b/src/Neat.ts
@@ -15,12 +15,12 @@ import { addTag, getTag, removeTag } from "../src/tags/TagsInterface.ts";
 import { fineTuneImprovement } from "./architecture/FineTune.ts";
 import { makeElitists } from "../src/architecture/elitism.ts";
 import { Network } from "./architecture/Network.ts";
-import { ensureDirSync } from "https://deno.land/std@0.194.0/fs/ensure_dir.ts";
+import { ensureDirSync } from "https://deno.land/std@0.197.0/fs/ensure_dir.ts";
 import { Mutation } from "./methods/mutation.ts";
 import { Selection } from "./methods/Selection.ts";
 import { Offspring } from "./architecture/Offspring.ts";
 import { NetworkUtil } from "./architecture/NetworkUtils.ts";
-import { format } from "https://deno.land/std@0.194.0/fmt/duration.ts";
+import { format } from "https://deno.land/std@0.197.0/fmt/duration.ts";
 
 export class Neat {
   readonly input: number;

diff --git a/src/architecture/Network.ts b/src/architecture/Network.ts
@@ -15,14 +15,14 @@ import { make as makeConfig } from "../config/NeatConfig.ts";
 import { NeatOptions } from "../config/NeatOptions.ts";
 import { DataRecordInterface } from "./DataSet.ts";
 
-import { yellow } from "https://deno.land/std@0.194.0/fmt/colors.ts";
+import { yellow } from "https://deno.land/std@0.197.0/fmt/colors.ts";
 import { Neat } from "../Neat.ts";
 import { makeDataDir } from "../architecture/DataSet.ts";
 import { WorkerHandler } from "../multithreading/workers/WorkerHandler.ts";
 import { getTag } from "../tags/TagsInterface.ts";
 
-import { format } from "https://deno.land/std@0.194.0/fmt/duration.ts";
-import { emptyDirSync } from "https://deno.land/std@0.194.0/fs/empty_dir.ts";
+import { format } from "https://deno.land/std@0.197.0/fmt/duration.ts";
+import { emptyDirSync } from "https://deno.land/std@0.197.0/fs/empty_dir.ts";
 import { CostInterface, Costs } from "../Costs.ts";
 import { Node } from "../architecture/Node.ts";
 import { findRatePolicy, randomPolicyName } from "../config.ts";

diff --git a/src/architecture/NetworkUtils.ts b/src/architecture/NetworkUtils.ts
@@ -1,4 +1,4 @@
-import { generate as generateV5 } from "https://deno.land/std@0.194.0/uuid/v5.ts";
+import { generate as generateV5 } from "https://deno.land/std@0.197.0/uuid/v5.ts";
 import { Network } from "./Network.ts";
 
 export class NetworkUtil {
@@ -26,11 +26,12 @@ export class NetworkUtil {
         delete c.trace;
       },
     );
-    delete json.tags;
-    delete json.uuid;
-    delete json.score;
+    const tmp = {
+      nodes: json.nodes,
+      connections: json.connections,
+    };
 
-    const txt = JSON.stringify(json, null, 1);
+    const txt = JSON.stringify(tmp);
 
     const utf8 = NetworkUtil.TE.encode(txt);
 

diff --git a/src/tags/TagAndReleaseApp.ts b/src/tags/TagAndReleaseApp.ts
@@ -1,4 +1,4 @@
-import { parse as parseArgs } from "https://deno.land/std@0.194.0/flags/mod.ts";
+import { parse as parseArgs } from "https://deno.land/std@0.197.0/flags/mod.ts";
 import { addTag } from "./TagsInterface.ts";
 
 interface TagAndReleaseOptions {

diff --git a/test/CRISPR.ts b/test/CRISPR.ts
@@ -1,11 +1,14 @@
-import { assertEquals } from "https://deno.land/[email protected]/testing/asserts.ts";
+import {
+  assert,
+  assertEquals,
+} from "https://deno.land/[email protected]/assert/mod.ts";
 
 import { CRISPR } from "../src/reconstruct/CRISPR.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { getTag } from "../src/tags/TagsInterface.ts";
 import { Node } from "../src/architecture/Node.ts";
 import { Mutation } from "../src/methods/mutation.ts";
-import { assert } from "https://deno.land/[email protected]/_util/asserts.ts";
+
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
 
 ((globalThis as unknown) as { DEBUG: boolean }).DEBUG = true;

diff --git a/test/Clipped.ts b/test/Clipped.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Compact.ts b/test/Compact.ts
@@ -3,7 +3,7 @@ import {
   assert,
   assertAlmostEquals,
   fail,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
 

diff --git a/test/Constant.ts b/test/Constant.ts
@@ -1,7 +1,7 @@
 import {
   assert,
   assertAlmostEquals,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Correct.ts b/test/Correct.ts
@@ -1,4 +1,4 @@
-import { assertAlmostEquals } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assertAlmostEquals } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Costs.ts b/test/Costs.ts
@@ -1,4 +1,4 @@
-import { assertAlmostEquals } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assertAlmostEquals } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Costs } from "../src/Costs.ts";
 import { MSELimit } from "../src/costs/MSELimit.ts";
 import { TwelveSteps } from "../src/costs/TwelveSteps.ts";

diff --git a/test/CreatureStore.ts b/test/CreatureStore.ts
@@ -1,5 +1,5 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
-import { emptyDirSync } from "https://deno.land/std@0.194.0/fs/empty_dir.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
+import { emptyDirSync } from "https://deno.land/std@0.197.0/fs/empty_dir.ts";
 import { NeatOptions } from "../src/config/NeatOptions.ts";
 import { Network } from "../src/architecture/Network.ts";
 

diff --git a/test/Elitism.ts b/test/Elitism.ts
@@ -1,5 +1,5 @@
 import { makeElitists } from "../src/architecture/elitism.ts";
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
 import { Network } from "../src/architecture/Network.ts";
 

diff --git a/test/Evolve.ts b/test/Evolve.ts
@@ -1,5 +1,5 @@
 import { Network } from "../src/architecture/Network.ts";
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Mutation } from "../src/methods/mutation.ts";
 
 ((globalThis as unknown) as { DEBUG: boolean }).DEBUG = true;

diff --git a/test/ExperimentStore.ts b/test/ExperimentStore.ts
@@ -1,5 +1,5 @@
 import { Neat } from "../src/Neat.ts";
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { addTag } from "../src/tags/TagsInterface.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { NetworkUtil } from "../src/architecture/NetworkUtils.ts";

diff --git a/test/FineTune.ts b/test/FineTune.ts
@@ -1,6 +1,6 @@
 import { fineTuneImprovement } from "../src/architecture/FineTune.ts";
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { addTag } from "../src/tags/TagsInterface.ts";
 

diff --git a/test/FineTuneUUID.ts b/test/FineTuneUUID.ts
@@ -2,7 +2,7 @@ import {
   assertAlmostEquals,
   assertEquals,
   fail,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { fineTuneImprovement } from "../src/architecture/FineTune.ts";
 import { Network } from "../src/architecture/Network.ts";
 

diff --git a/test/Fix.ts b/test/Fix.ts
@@ -1,4 +1,4 @@
-import { assertEquals } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assertEquals } from "https://deno.land/std@0.197.0/assert/mod.ts";
 
 import { Network } from "../src/architecture/Network.ts";
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Hypot.ts b/test/Hypot.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/IfElse.ts b/test/IfElse.ts
@@ -1,7 +1,7 @@
 import {
   assert,
   assertAlmostEquals,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/InConnections.ts b/test/InConnections.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/InFocus.ts b/test/InFocus.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 ((globalThis as unknown) as { DEBUG: boolean }).DEBUG = true;
 

diff --git a/test/Maximum.ts b/test/Maximum.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Mean.ts b/test/Mean.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Minimum.ts b/test/Minimum.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Network.ts b/test/Network.ts
@@ -3,10 +3,10 @@ import {
   assertAlmostEquals,
   assertEquals,
   assertNotEquals,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
-import { emptyDirSync } from "https://deno.land/std@0.194.0/fs/empty_dir.ts";
+import { emptyDirSync } from "https://deno.land/std@0.197.0/fs/empty_dir.ts";
 import { DataRecordInterface } from "../src/architecture/DataSet.ts";
 import { Offspring } from "../src/architecture/Offspring.ts";
 import { NeatOptions } from "../src/config/NeatOptions.ts";

diff --git a/test/NetworkUUID.ts b/test/NetworkUUID.ts
@@ -3,7 +3,7 @@ import {
   assert,
   assertEquals,
   assertNotEquals,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { NetworkUtil } from "../src/architecture/NetworkUtils.ts";
 import { Neat } from "../src/Neat.ts";
@@ -46,7 +46,7 @@ Deno.test("knownName", async () => {
   console.log("UUID", uuid);
 
   assert(
-    uuid == "5d82864b-dd93-55aa-af4a-0456ed67dd13",
+    uuid == "7750d0bf-6972-5e4b-92f5-1bbd9da220f7",
     "Wrong UUID was: " + uuid,
   );
 });
@@ -132,7 +132,7 @@ Deno.test("ignoreTags", async () => {
 
   /** Manually update if needed. */
   assert(
-    uuid2 == "f5c7dea8-c1d9-51ed-b79f-22751f1d65de",
+    uuid2 == "91c2c15c-3ba4-52de-bf60-5c1c129875b2",
     "Wrong UUID was: " + uuid2,
   );
 });

diff --git a/test/NodeUUID.ts b/test/NodeUUID.ts
@@ -2,7 +2,7 @@ import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
 import {
   assert,
   assertEquals,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 ((globalThis as unknown) as { DEBUG: boolean }).DEBUG = true;

diff --git a/test/OffSpring.ts b/test/OffSpring.ts
@@ -1,7 +1,7 @@
 import { Neat } from "../src/Neat.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { Offspring } from "../src/architecture/Offspring.ts";
-import { assertEquals } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assertEquals } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
 
 ((globalThis as unknown) as { DEBUG: boolean }).DEBUG = true;

diff --git a/test/Projection.ts b/test/Projection.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Ratios.ts b/test/Ratios.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { NeatOptions } from "../src/config/NeatOptions.ts";
 import { Network } from "../src/architecture/Network.ts";
 

diff --git a/test/TagAndRelease.ts b/test/TagAndRelease.ts
@@ -1,4 +1,4 @@
-import { assertEquals } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assertEquals } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { TagAndRelease } from "../src/tags/TagAndReleaseApp.ts";
 import { getTag } from "../src/tags/TagsInterface.ts";
 

diff --git a/test/TagNode.ts b/test/TagNode.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Tags.ts b/test/Tags.ts
@@ -9,7 +9,7 @@ import { Network } from "../src/architecture/Network.ts";
 import {
   assert,
   assertEquals,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 ((globalThis as unknown) as { DEBUG: boolean }).DEBUG = true;
 
 Deno.test("tag", () => {

diff --git a/test/TraceAggregate.ts b/test/TraceAggregate.ts
@@ -1,7 +1,7 @@
 import {
   assert,
   assertAlmostEquals,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
 

diff --git a/test/TraceNode.ts b/test/TraceNode.ts
@@ -1,5 +1,5 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
-import { emptyDirSync } from "https://deno.land/std@0.194.0/fs/empty_dir.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
+import { emptyDirSync } from "https://deno.land/std@0.197.0/fs/empty_dir.ts";
 import { NeatOptions } from "../src/config/NeatOptions.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/TraceStore.ts b/test/TraceStore.ts
@@ -1,5 +1,5 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
-import { emptyDirSync } from "https://deno.land/std@0.194.0/fs/empty_dir.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
+import { emptyDirSync } from "https://deno.land/std@0.197.0/fs/empty_dir.ts";
 import { NeatOptions } from "../src/config/NeatOptions.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";

diff --git a/test/Train.ts b/test/Train.ts
@@ -1,5 +1,5 @@
 import { Network } from "../src/architecture/Network.ts";
-import { assert, fail } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert, fail } from "https://deno.land/std@0.197.0/assert/mod.ts";
 
 ((globalThis as unknown) as { DEBUG: boolean }).DEBUG = true;
 

diff --git a/test/Worker.ts b/test/Worker.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { WorkerHandler } from "../src/multithreading/workers/WorkerHandler.ts";
 
 ((globalThis as unknown) as { DEBUG: boolean }).DEBUG = true;

diff --git a/test/addNode.ts b/test/addNode.ts
@@ -1,4 +1,4 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
 

diff --git a/test/ifPropagation.ts b/test/ifPropagation.ts
@@ -1,5 +1,5 @@
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
-import { emptyDirSync } from "https://deno.land/std@0.194.0/fs/empty_dir.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
+import { emptyDirSync } from "https://deno.land/std@0.197.0/fs/empty_dir.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
 import { ConnectionTrace } from "../src/architecture/ConnectionInterfaces.ts";

diff --git a/test/makeActivation.ts b/test/makeActivation.ts
@@ -1,6 +1,6 @@
 import {
   assertAlmostEquals,
-} from "https://deno.land/std@0.194.0/testing/asserts.ts";
+} from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { NetworkState } from "../src/architecture/NetworkState.ts";
 

diff --git a/test/toJSON.ts b/test/toJSON.ts
@@ -1,5 +1,5 @@
 import { NetworkInternal } from "../src/architecture/NetworkInterfaces.ts";
-import { assert } from "https://deno.land/std@0.194.0/testing/asserts.ts";
+import { assert } from "https://deno.land/std@0.197.0/assert/mod.ts";
 import { Network } from "../src/architecture/Network.ts";
 import { ConnectionInternal } from "../src/architecture/ConnectionInterfaces.ts";