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should we limit bioconda sourmash packages by Python version? #2442

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ctb opened this issue Jan 10, 2023 · 2 comments
Open

should we limit bioconda sourmash packages by Python version? #2442

ctb opened this issue Jan 10, 2023 · 2 comments

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@ctb
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ctb commented Jan 10, 2023

I ran into this problem that appears to happen because:

  • sourmash (bioconda) is a pure Python package that is available for Python 3.7
  • sourmash-minimal (conda-forge) is only available for Python 3.8, 3.9, and 3.10
  • so when trying to install sourmash on Python 3.7, it can't find an appropriate sourmash-minimal for recent versions.

The meta.yaml bioconda recipe doesn't seem to restrict Python version in any way -

https://github.com/bioconda/bioconda-recipes/pull/38223/files

Is this something we can/should change?

@ctb
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ctb commented Apr 8, 2023

ref #2503

@luizirber
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Probably a good idea, and we should bump in bioconda as we bump minimum Python version here.
#2848 drops 3.8 and 3.9 too.

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