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The function load_file_list_of_signatures in src/sourmash/sourmash_args.py was initially used only for loading a text file that contained a list of signature filenames, but since has changed (e.g. #1362) to support lists of FASTA files.
TODO:
rename the function to load_pathlist_from_file (or a better name if you have one :)
find all places where the old name is used in the code base, perhaps with git grep -l load_file_list_of_signatures and rename it there
optionally, add some Python unit tests in tests/test_sourmash.py for this function, including empty file list, badly formatted ones, ones with duplicates, ???
The text was updated successfully, but these errors were encountered:
The function
load_file_list_of_signatures
insrc/sourmash/sourmash_args.py
was initially used only for loading a text file that contained a list of signature filenames, but since has changed (e.g. #1362) to support lists of FASTA files.TODO:
load_pathlist_from_file
(or a better name if you have one :)git grep -l load_file_list_of_signatures
and rename it theretests/test_sourmash.py
for this function, including empty file list, badly formatted ones, ones with duplicates, ???The text was updated successfully, but these errors were encountered: