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Error using --add-orf-stop
#88
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Hi, Hmm. Thank you, this needs checking... Thank you |
Hi, I was able to reproduce your problem. The parameter you set is an MMseqs2 parameter, which should be blocked from MetaEuk because it messes it up. But I think you can actually get the info you need about stop codons by setting the MetaEuk param instead: Thank you for reporting this! Best, |
The MMseqs2 parameter was blocked in the latest commit (6643). Please use --write-frag-coords 1 for information about stop codon positions. |
Thanks! |
and sorry for your inconvenience... :-/
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Thanks!
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Hi, I am encountering an error when I add the
--add-orf-stop
option to ametaeuk easy-predict
run.Here's my command:
This works fine without the
--add-orf-stop
option, but once I add it in I getThe relevant line in the code base is https://github.com/soedinglab/metaeuk/blob/master/src/exonpredictor/unitesetstofasta.cpp#L61
Might this be a bug?
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