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Pull requests: snakemake/snakemake-wrappers

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Pull requests list

feat: bowtie2 can now sort with samtools and picard
#3518 opened Dec 3, 2024 by jlanga Loading…
7 tasks done
chore: release 5.4.0 autorelease: pending
#3505 opened Nov 28, 2024 by github-actions bot Loading…
feat: Varscan2 - SnpEff Meta wrapper
#3501 opened Nov 26, 2024 by tdayris Loading…
7 tasks done
feat: NGSCheckMate
#3498 opened Nov 25, 2024 by tdayris Loading…
7 tasks done
perf: autobump bio/rubic bio/rubic
#3364 opened Oct 25, 2024 by snakedeploy-bot bot Loading…
feat: added wrapper for Paraphase
#3071 opened Jul 15, 2024 by MagdalenaZZ Loading…
1 task done
feat: Add a wrapper for quarto markdown rendering
#3003 opened Jun 20, 2024 by votti Loading…
1 task done
perf: autobump bio/sortmerna bio/sortmerna
#2985 opened Jun 7, 2024 by snakedeploy-bot bot Loading…
feat: ensembl reference collections
#2977 opened Jun 3, 2024 by mauripops Loading…
1 task done
feat: add aria2c wrapper
#2725 opened Mar 7, 2024 by fgvieira Loading…
1 task done
feat: add Orthanq wrappers for hla and virus applications
#2640 opened Feb 4, 2024 by huzuner Loading…
1 task
feat: add wrapper for metaDMG Stale
#1809 opened Sep 19, 2023 by fgvieira Draft
1 task done
feat: add ngsngs wrapper Stale
#1808 opened Sep 19, 2023 by fgvieira Draft
1 task done
feat: new inphared-db wrapper Stale
#1550 opened Jul 20, 2023 by nacnoriko Loading…
1 task
feat: add wrapper for rbt vcf_fix_iupac_alleles
#1209 opened Apr 5, 2023 by fgvieira Loading…
1 task done
fix: Allow concurrent and large refgenie downloads Stale
#1172 opened Mar 28, 2023 by Austin-s-h Loading…
1 task done
Update wrapper documentation Stale
#392 opened Jul 22, 2021 by tdayris Loading…
10 of 12 tasks
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