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fix: update to using storage plugin ftp (#76)
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* fix: update to using storage plugin ftp

* fix: require a recent snakemake above version 8.0

* chore: remove unnecessary FTP import
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dlaehnemann authored Mar 25, 2024
1 parent 3380a05 commit 0f18be7
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Showing 2 changed files with 1 addition and 4 deletions.
2 changes: 1 addition & 1 deletion workflow/Snakefile
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from snakemake.utils import min_version

##### set minimum snakemake version #####
min_version("6.4.1")
min_version("8.8.0")


##### setup report #####
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3 changes: 0 additions & 3 deletions workflow/rules/common.smk
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@@ -1,11 +1,8 @@
import glob

import pandas as pd
from snakemake.remote import FTP
from snakemake.utils import validate

ftp = FTP.RemoteProvider()

validate(config, schema="../schemas/config.schema.yaml")

samples = (
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