v0.1.6: fix a bug for smaller set of GT

single-cell-genetics · Oct 5, 2019 · 34b52d7 · 34b52d7
1 parent a0fbcd9
commit 34b52d7
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diff --git a/vireoSNP/version.py b/vireoSNP/version.py
@@ -1 +1 @@
-__version__ = "0.1.5"
+__version__ = "0.1.6"
diff --git a/vireoSNP/vireo.py b/vireoSNP/vireo.py
@@ -143,7 +143,7 @@ def main():
             options.geno_tag)
 
         mm_idx = match(cell_vcf['variants'], donor_vcf['variants'])
-        idx1 = np.where(mm_idx != None)[0]
+        idx1 = np.where(mm_idx == mm_idx)[0] #remove None
         idx2 = mm_idx[idx1].astype(int)
 
         donor_GPb = donor_GPb[idx2, :, :]