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TileDB-SOMA 1.5.0rc2

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@johnkerl johnkerl released this 11 Oct 17:26
· 55 commits to release-1.5 since this release
4e3a518

New features added

  • [Backport release-1.5] [python] Support obs_id_name and var_id_name in tiledbsoma.io.from_anndata by @github-actions in #1750
  • [Backport release-1.5] [python] Allow adata.X to be None by @github-actions in #1772
  • [Backport release-1.5] [python] Ingest 2D uns string arrays (e.g. color labels) by @github-actions in #1773

Minor changes

  • [Backport release-1.5] [ci/r] Use TileDB-R 0.21.1 binaries by @github-actions in #1751
  • [Backport release-1.5] [ci] Update tools used in pre-commit testing by @github-actions in #1754
  • [Backport release-1.5] [r] Remove duplicated step in workflow by @github-actions in #1760
  • [Backport release-1.5] [r] Update installed packages in workflow by @github-actions in #1761
  • [Backport release-1.5] [python] Temporarily pin to AnnData 0.9.* by @github-actions in #1771
  • Manually backport #1757 by @johnkerl in #1781
  • Manually backport #1779 by @johnkerl in #1782

Bug fixes

  • [Backport release-1.5] [python] Check for downgraded categorical write by @github-actions in #1752
  • [Backport release-1.5] [c++] Rework SOMAArray reader iterator sequence by @github-actions in #1753
  • [Backport release-1.5] [python] Fix and auto-test notebook paths by @github-actions in #1780

Full Changelog: 1.5.0rc1...1.5.0rc2