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[c++] Rework SOMAArray reader iterator sequence #1749

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nguyenv
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@nguyenv nguyenv commented Sep 30, 2023

Issue and/or context:

#1744

Changes:

  • Do not submit query until read_next() is called
  • Remove SOMAArray::submit()

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codecov-commenter commented Sep 30, 2023

Codecov Report

All modified lines are covered by tests ✅

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see 43 files with indirect coverage changes

📢 Thoughts on this report? Let us know!.

@nguyenv nguyenv force-pushed the viviannguyen/sc-34827/background-research-for-soma-array-reader branch from d87b406 to 206beeb Compare September 30, 2023 18:26
@johnkerl johnkerl changed the title [c++] Rework SOMAArray Reader Iterator Sequence [c++] Rework SOMAArray reader iterator sequence Oct 2, 2023
@nguyenv nguyenv force-pushed the viviannguyen/sc-34827/background-research-for-soma-array-reader branch from 3e51a0b to 6b4c522 Compare October 2, 2023 14:44
johnkerl added a commit that referenced this pull request Oct 2, 2023
johnkerl added a commit that referenced this pull request Oct 2, 2023
@nguyenv nguyenv marked this pull request as ready for review October 2, 2023 17:04
@nguyenv nguyenv requested a review from eddelbuettel October 2, 2023 19:41
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Nice work!

@johnkerl johnkerl merged commit 1e8df1e into main Oct 3, 2023
@johnkerl johnkerl deleted the viviannguyen/sc-34827/background-research-for-soma-array-reader branch October 3, 2023 16:51
github-actions bot pushed a commit that referenced this pull request Oct 3, 2023
* [c++] Rework `SOMAArray` Reader Iterator Sequence

* Set Up Buffers BEFORE Returning

* Rename Functions, Modify R Code

* Submit Read When Query is Empty

* Correct `first_read_next_` setting

* [WIP] Remove Coverage "just to see"

* [WIP] View Test Output If Failed

* Update Packages in R CI

* Also Update in R-Python Interop

* Replace apt install with  Rscript -e 'update.packages(ask=FALSE)'

* Restore Coverage
johnkerl pushed a commit that referenced this pull request Oct 3, 2023
* [c++] Rework `SOMAArray` Reader Iterator Sequence

* Set Up Buffers BEFORE Returning

* Rename Functions, Modify R Code

* Submit Read When Query is Empty

* Correct `first_read_next_` setting

* [WIP] Remove Coverage "just to see"

* [WIP] View Test Output If Failed

* Update Packages in R CI

* Also Update in R-Python Interop

* Replace apt install with  Rscript -e 'update.packages(ask=FALSE)'

* Restore Coverage

Co-authored-by: Vivian Nguyen <[email protected]>
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4 participants