copy from r-ci.yaml

single-cell-data · Sep 15, 2023 · ed41e98 · ed41e98
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commit ed41e98
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diff --git a/.github/workflows/r-ci.yml b/.github/workflows/r-ci.yml
@@ -40,11 +40,11 @@ jobs:
       - name: Install BioConductor package SingleCellExperiment
         run: cd apis/r && tools/r-ci.sh install_bioc SingleCellExperiment
 
-      - name: Install rc version of tiledb-r (macOS)
+      - name: Install r-universe build of tiledb-r (macOS)"
         if: ${{ matrix.os == 'macOS-latest' }}
         run: cd apis/r && Rscript -e "install.packages('tiledb', repos = c('https://eddelbuettel.r-universe.dev', 'https://cloud.r-project.org'))"
 
-      - name: Install rc version of tiledb-r (linux)
+      - name: Install r-universe build of tiledb-r (linux)"
         if: ${{ matrix.os != 'macOS-latest' }}
         run: cd apis/r && Rscript -e "options(bspm.version.check=TRUE); install.packages('tiledb', repos = c('https://eddelbuettel.r-universe.dev/bin/linux/jammy/4.3/', 'https://cloud.r-project.org'))"      
 

diff --git a/.github/workflows/r-python-interop-testing.yml b/.github/workflows/r-python-interop-testing.yml
@@ -39,6 +39,14 @@ jobs:
       - name: MkVars
         run: mkdir ~/.R && echo "CXX17FLAGS=-Wno-deprecated-declarations -Wno-deprecated" > ~/.R/Makevars
 
+      - name: Install r-universe build of tiledb-r (macOS)"
+        if: ${{ matrix.os == 'macOS-latest' }}
+        run: cd apis/r && Rscript -e "install.packages('tiledb', repos = c('https://eddelbuettel.r-universe.dev', 'https://cloud.r-project.org'))"
+
+      - name: Install r-universe build of tiledb-r (linux)"
+        if: ${{ matrix.os != 'macOS-latest' }}
+        run: cd apis/r && Rscript -e "options(bspm.version.check=TRUE); install.packages('tiledb', repos = c('https://eddelbuettel.r-universe.dev/bin/linux/jammy/4.3/', 'https://cloud.r-project.org'))"
+
       - name: Build and install libtiledbsoma
         run: sudo scripts/bld --prefix=/usr/local && sudo ldconfig