[r] Several micro-tweak post latest rebase

single-cell-data · Aug 31, 2023 · 4668e2e · 4668e2e
1 parent 059b13f
commit 4668e2e
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Showing 10 changed files with 20 additions and 21 deletions.
diff --git a/apis/r/R/ReadIter.R b/apis/r/R/ReadIter.R
@@ -59,7 +59,7 @@ ReadIter <- R6::R6Class(
     # to be refined in derived classes
     soma_reader_transform = function(x) {
       .NotYetImplemented()
-    }
+    },
 
     finalize = function() {
       spdl::debug("[finalizer] Entered")

diff --git a/apis/r/R/TileDBArray.R b/apis/r/R/TileDBArray.R
@@ -142,7 +142,7 @@ TileDBArray <- R6::R6Class(
 
     #' @description Retrieve the range of indexes for a dimension that were
     #'  explicitly written.
-    #' @param simplify Return a vector of [`bit64:integer64`]s containing only
+    #' @param simplify Return a vector of [`bit64::integer64`]s containing only
     #' the upper bounds.
     #' @param index1 Return the used shape with 1-based indices (0-based indices are returned by default)
     #' @return A list containing the lower and upper bounds for the used shape.

diff --git a/apis/r/man/ReadIter.Rd b/apis/r/man/ReadIter.Rd
diff --git a/apis/r/man/SOMAAxisIndexer.Rd b/apis/r/man/SOMAAxisIndexer.Rd
diff --git a/apis/r/man/SOMAAxisQueryResult.Rd b/apis/r/man/SOMAAxisQueryResult.Rd
diff --git a/apis/r/man/SOMADataFrame.Rd b/apis/r/man/SOMADataFrame.Rd
diff --git a/apis/r/man/SOMADenseNDArray.Rd b/apis/r/man/SOMADenseNDArray.Rd
diff --git a/apis/r/man/SOMAExperimentAxisQuery.Rd b/apis/r/man/SOMAExperimentAxisQuery.Rd
diff --git a/apis/r/man/TileDBArray.Rd b/apis/r/man/TileDBArray.Rd
diff --git a/apis/r/src/riterator.cpp b/apis/r/src/riterator.cpp
@@ -89,7 +89,6 @@ Rcpp::XPtr<tdbs::SOMAArray> sr_setup(const std::string& uri,
 
     std::string_view name = "unnamed";
     std::vector<std::string> column_names = {};
-    std::map<std::string, std::string> platform_config = config_vector_to_map(Rcpp::wrap(config));
     if (!colnames.isNull()) {
         column_names = Rcpp::as<std::vector<std::string>>(colnames);
     }