TileDB-SOMA R CI

[c++] Fix upgrade-soma-joinid-shape for dataframes having non-standar… #7147

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Job	Run time
ci (linux, ubuntu-24.04, no)	18m 6s
ci (macos, macOS-latest, no)	5m 29s
ci (coverage, ubuntu-24.04, yes)	14m 21s
	37m 56s