TileDB-SOMA R CI

[c++] Fix upgrade-soma-joinid-shape for dataframes having non-standar… #7146

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Job	Run time
ci (linux, ubuntu-24.04, no)	17m 33s
ci (macos, macOS-latest, no)	5m 54s
ci (coverage, ubuntu-24.04, yes)	14m 25s
	37m 52s