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add shebang; make executable
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ickc committed Feb 27, 2024
1 parent 066b8bd commit 533eb64
Showing 1 changed file with 4 additions and 6 deletions.
10 changes: 4 additions & 6 deletions pipeline/run_all.sh
100644 → 100755
Original file line number Diff line number Diff line change
@@ -1,3 +1,5 @@
#!/usr/bin/env bash

paramfile='../paramfiles/paramfile_SAT.yaml'

echo "Running pipeline with paramfile: ${paramfile}"
Expand All @@ -13,7 +15,7 @@ python mask_handler.py --globals ${paramfile} --plots

echo "Running mock stage for data..."
echo "------------------------------"
python mocker.py --globals ${paramfile}
python mocker.py --globals ${paramfile}

echo "Running mock stage for sims..."
echo "------------------------------"
Expand All @@ -23,7 +25,6 @@ echo "Running mcm..."
echo "--------------"
python mcmer.py --globals ${paramfile} --plot


echo "------------------------------------------------------------"
echo "| FILTERING SIMULATIONS AND DATA |"
echo "------------------------------------------------------------"
Expand All @@ -45,7 +46,6 @@ echo "-------------------------"
python filterer.py --globals ${paramfile} --data
#OMP_NUM_THREADS=2 mpirun -n 4 python filterer.py --globals ${paramfile} --data


echo "------------------------------------------------------------"
echo "| COMPUTING POWER SPECTRA |"
echo "------------------------------------------------------------"
Expand All @@ -66,7 +66,6 @@ echo "Transfer validation"
echo "---------------------"
python transfer_validator.py --globals ${paramfile}


echo "Running pcler on data"
echo "---------------------"
python pcler.py --globals ${paramfile} --data --plots
Expand All @@ -75,11 +74,10 @@ echo "Running pcler on sims"
echo "---------------------"
python pcler.py --globals ${paramfile} --sims


echo "Running coadder on data"
echo "---------------------"
python coadder.py --globals ${paramfile} --data --plots

echo "Running coadder on sims"
echo "---------------------"
python coadder.py --globals ${paramfile} --sims
python coadder.py --globals ${paramfile} --sims

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