Merge branch 'main' of github.com:sigven/pcgr

conda/env/lock/pcgr-linux-64.lock

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 05281bc3c331be5d12bb1c83433c007c3bf88147c2376541ee51826efe9b7180
+# input_hash: e0bb967a48030190e9194ebda85d220d2aa530d652f188c1f0b4f31f99074c41
 @EXPLICIT
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@@ -15,8 +15,8 @@ https://conda.anaconda.org/conda-forge/linux-64/libgomp-14.1.0-h77fa898_0.conda#
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-https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.28.1-hd590300_0.conda#dcde58ff9a1f30b0037a2315d1846d1f
+https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-h4bc722e_7.conda#62ee74e96c5ebb0af99386de58cf9553
+https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.32.2-h4bc722e_0.conda#8024af1ee7078e37fa3101c0a0296af2
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@@ -39,13 +39,13 @@ https://conda.anaconda.org/bioconda/linux-64/poa-2.0-h031d066_5.tar.bz2#7f92f2dd
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+https://conda.anaconda.org/bioconda/linux-64/bedtools-2.31.1-hf5e1c6e_2.tar.bz2#55aacbd977c83d6d4849c91310ef48c5
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+https://conda.anaconda.org/conda-forge/linux-64/libabseil-20240116.2-cxx17_he02047a_1.conda#c48fc56ec03229f294176923c3265c05
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@@ -59,7 +59,7 @@ https://conda.anaconda.org/conda-forge/linux-64/lz4-c-1.9.4-hcb278e6_0.conda#318
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+https://conda.anaconda.org/bioconda/linux-64/ncbi-vdb-3.1.1-h4ac6f70_1.tar.bz2#05705db906896430d0d963de7a3c1698
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@@ -68,7 +68,7 @@ https://conda.anaconda.org/conda-forge/linux-64/zlib-1.2.13-h4ab18f5_6.conda#559
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+https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.27-pthreads_hac2b453_1.conda#ae05ece66d3924ac3d48b4aa3fa96cec
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@@ -148,14 +148,14 @@ https://conda.anaconda.org/bioconda/noarch/perl-types-serialiser-1.01-pl5321hdfd
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+https://conda.anaconda.org/conda-forge/noarch/setuptools-70.3.0-pyhd8ed1ab_0.conda#693bb57e8f92120caa956898065f3627
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-https://conda.anaconda.org/bioconda/linux-64/htslib-1.20-h5efdd21_1.tar.bz2#451deefa67e250cf3268a484d9734465
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@@ -172,23 +172,23 @@ https://conda.anaconda.org/bioconda/linux-64/perl-pathtools-3.75-pl5321hec16e2b_
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@@ -201,7 +201,7 @@ https://conda.anaconda.org/bioconda/linux-64/pybedtools-0.10.0-py312ha1f7cf2_1.t
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-https://conda.anaconda.org/pcgr/noarch/pcgr-2.0.1-py_0.tar.bz2#eec67f68553213c0227d7d9fc3b9dcdb
+https://conda.anaconda.org/pcgr/noarch/pcgr-2.0.2-py_0.tar.bz2#5bc257e15d72598686e5a627889a2d2d
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conda/env/lock/pcgr-osx-64.lock

@@ -1,10 +1,8 @@
 # Generated by conda-lock.
 # platform: osx-64
-# input_hash: 4066030da1213363917d57a6ac2a7fe6b72e4638610a31adb70476c89bd137b1
+# input_hash: 9ace53fcafd294f50dccff55d42d6f90d7301818e3f8ef8a84913b776eac31bb
 @EXPLICIT
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@@ -74,7 +74,7 @@ https://conda.anaconda.org/bioconda/osx-64/perl-url-encode-0.03-pl5321h527b516_0
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+https://conda.anaconda.org/bioconda/osx-64/bedtools-2.31.1-hdd9cfa2_2.tar.bz2#1f66f8ceac0e134b67f297caa63c0450
 https://conda.anaconda.org/bioconda/osx-64/clustalo-1.2.4-h7133b54_8.tar.bz2#cb5f47a0f971ecca37aea71f0b9acc5e
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@@ -95,7 +95,7 @@ https://conda.anaconda.org/conda-forge/osx-64/lz4-c-1.9.4-hf0c8a7f_0.conda#aa04f
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 https://conda.anaconda.org/conda-forge/osx-64/mysql-connector-c-6.1.11-h0f02589_1007.tar.bz2#de4b8b14c3d7e41de6a6b59b3ab1fbaa
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+https://conda.anaconda.org/bioconda/osx-64/ncbi-vdb-3.1.1-hac4f329_1.tar.bz2#ae9f2a45a5dca6ff09e444c7d4a3b655
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 https://conda.anaconda.org/bioconda/osx-64/perl-compress-raw-bzip2-2.201-pl5321h9722bc1_0.tar.bz2#4c703ab9164ee0caa175690828397a60
@@ -147,7 +147,7 @@ https://conda.anaconda.org/bioconda/osx-64/htslib-1.16-h567f53e_0.tar.bz2#bd9c90
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 https://conda.anaconda.org/conda-forge/osx-64/libclang-cpp12-12.0.1-default_he082bbe_4.tar.bz2#2e53c06139a0b687f970e0538c0c4fd7
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+https://conda.anaconda.org/conda-forge/osx-64/libopenblas-0.3.27-openmp_h8869122_1.conda#c0798ad76ddd730dade6ff4dff66e0b5
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 https://conda.anaconda.org/conda-forge/osx-64/mysql-server-8.0.32-ha134c4c_0.conda#a670483ac75d19fcc527de2a96058615
@@ -162,7 +162,7 @@ https://conda.anaconda.org/bioconda/osx-64/pysam-0.20.0-py310h958c131_0.tar.bz2#
 https://conda.anaconda.org/conda-forge/noarch/python-tzdata-2024.1-pyhd8ed1ab_0.conda#98206ea9954216ee7540f0c773f2104d
 https://conda.anaconda.org/conda-forge/noarch/pytz-2024.1-pyhd8ed1ab_0.conda#3eeeeb9e4827ace8c0c1419c85d590ad
 https://conda.anaconda.org/conda-forge/osx-64/pyyaml-6.0.1-py310h6729b98_1.conda#d964cec3e7972e44bc4a328134b9eaf1
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+https://conda.anaconda.org/conda-forge/noarch/setuptools-70.3.0-pyhd8ed1ab_0.conda#693bb57e8f92120caa956898065f3627
 https://conda.anaconda.org/conda-forge/noarch/six-1.16.0-pyh6c4a22f_0.tar.bz2#e5f25f8dbc060e9a8d912e432202afc2
 https://conda.anaconda.org/bioconda/osx-64/viennarna-2.6.4-py310pl5321hb5a725e_0.tar.bz2#6852d7b92265aa9865387826d7b36277
 https://conda.anaconda.org/conda-forge/noarch/wheel-0.43.0-pyhd8ed1ab_1.conda#0b5293a157c2b5cd513dd1b03d8d3aae
@@ -212,7 +212,7 @@ https://conda.anaconda.org/bioconda/noarch/perl-libwww-perl-6.67-pl5321hdfd78af_
 https://conda.anaconda.org/bioconda/osx-64/pybedtools-0.10.0-py310h0b3aad1_1.tar.bz2#ade72e96268dba2ca0ba1f728dfe4c43
 https://conda.anaconda.org/conda-forge/osx-64/scipy-1.14.0-py310h35d8cac_1.conda#c261d35d90ab2d683b13d140edd907af
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-https://conda.anaconda.org/pcgr/noarch/pcgr-2.0.1-py_0.tar.bz2#eec67f68553213c0227d7d9fc3b9dcdb
+https://conda.anaconda.org/pcgr/noarch/pcgr-2.0.2-py_0.tar.bz2#5bc257e15d72598686e5a627889a2d2d
 https://conda.anaconda.org/bioconda/noarch/perl-xml-dom-1.46-pl5321hdfd78af_1.tar.bz2#45b7ce435727456727f45b3e2121b23b
 https://conda.anaconda.org/bioconda/osx-64/t-coffee-12.00.7fb08c2-h26a2512_0.tar.bz2#fe6f3532da0e9d3868b58ecd07f33744
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