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v0.9.2

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@sherrillmix sherrillmix released this 23 Jun 19:05
· 32 commits to master since this release
  • Allow factors as input to accessionToTaxa
  • Document sqlite pragmas for read.accession2taxid
  • Inherit ... argument documentation for prepareDatabase
  • Catch input/output error while processing large files
  • Update various user-facing links from ftp to https for easier access
  • Add quote option to makeNewick
  • Trim trailing NAs off the tree in makeNewick if excludeTerminalNAs is TRUE
  • Add terminal semicolon to end of makeNewick tree unless terminator is NULL
  • Add "no rank" to normalizeTaxa's default exclusion
  • Expand README
  • Add normalizeTaxa function