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Gearys C and Morans I As Public API
Enhancement ✨
Triage 🩺
This issue needs to be triaged by a maintainer
#3291
opened Oct 17, 2024 by
ilan-gold
Plotting colors from obsm
Enhancement ✨
Triage 🩺
This issue needs to be triaged by a maintainer
#3277
opened Oct 10, 2024 by
canergen
Cannot save to defined path
Bug 🐛
Triage 🩺
This issue needs to be triaged by a maintainer
#3276
opened Oct 10, 2024 by
spatts14
2 of 3 tasks
sc.tl.score_genes -- ValueError: No valid genes were passed for scoring
Bug 🐛
Triage 🩺
This issue needs to be triaged by a maintainer
#3266
opened Sep 26, 2024 by
xyang2uchicago
3 tasks done
AttributeError: Can only use .str accessor with string values!
Bug 🐛
Needs info❔
More information needed
#3261
opened Sep 26, 2024 by
DUAN-GAO
2 of 3 tasks
regress_out
does not capture PerfectSeparation with statsmodels >= 0.14
Bug 🐛
Triage 🩺
#3260
opened Sep 25, 2024 by
jeskowagner
3 tasks done
Add scran nomalisation into scanpy
Area – Preprocessing 🧼
Enhancement ✨
#3255
opened Sep 23, 2024 by
le-ander
io
submodule from anndata
Enhancement ✨
Triage 🩺
#3245
opened Sep 20, 2024 by
ilan-gold
3 tasks
Why making feature names unique instead of aggregation?
Enhancement ✨
Question
#3241
opened Sep 18, 2024 by
VladimirShitov
Dask Sparse PCA
Area - Out of core 💾
Working with on disk data
Area – API
API design
Area – Performance 🐌
Enhancement ✨
rank_genes_groups fails to account for multiple comparsions when multiple groups are provided.
Bug 🐛
Triage 🩺
This issue needs to be triaged by a maintainer
#3221
opened Sep 2, 2024 by
a93sokol
3 tasks done
AttributeError: 'ColormapRegistry' object has no attribute 'get_cmap'
Area - Plotting 🌺
Bug 🐛
Needs info❔
More information needed
#3215
opened Aug 29, 2024 by
imraanGit
2 of 3 tasks
Rank_genes_groups -> does not return Axes
Bug 🐛
Triage 🩺
This issue needs to be triaged by a maintainer
#3205
opened Aug 12, 2024 by
dansteiert
3 tasks done
sc.tl.dendrogram no longer(?) works in backed mode
Area - Out of core 💾
Working with on disk data
Area - Plotting 🌺
Bug 🐛
#3199
opened Aug 6, 2024 by
flying-sheep
2 of 3 tasks
Don't prepend API design
breaking change ‼️
"X_"
Area – API
#3188
opened Aug 1, 2024 by
flying-sheep
ingest confidence thresholding
Area - Topology 🍩
Neighbor graphs
Enhancement ✨
#3160
opened Jul 22, 2024 by
sakatash
Enhance scanpy.tl.rank_gene_groups with additional filters (min_pct, etc.,)
Enhancement ✨
Triage 🩺
This issue needs to be triaged by a maintainer
#3159
opened Jul 17, 2024 by
osmanmerdan
scanpy.pl.highest_expr_genes boxplots contain extra gene rows
Bug 🐛
Triage 🩺
This issue needs to be triaged by a maintainer
#3158
opened Jul 17, 2024 by
adkinsrs
3 tasks done
Change the size of gene symbol labels on x axis
Enhancement ✨
Triage 🩺
This issue needs to be triaged by a maintainer
#3149
opened Jul 11, 2024 by
ngvananh2508
Investigate Array API usage in scanpy codebase
Enhancement ✨
Needs info❔
More information needed
RFC/ Discussion
For discussing proposed changes
#3136
opened Jul 2, 2024 by
ilan-gold
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