Code

added dockerfile#177

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Merged

Intron7 merged 47 commits intoscverse:mainscverse/rapids_singlecell:mainfrom thawn:dockerthawn/rapids_singlecell:dockerCopy head branch name to clipboardMay 10, 2024

+194

Commits

Commits on Apr 24, 2024

• added dockerfile

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  thawn

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• [pre-commit.ci] auto fixes from pre-commit.com hooks

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Commits on May 2, 2024

• Merge branch 'main' into docker

  Intron7

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Commits on May 3, 2024

• install dependencies into separate container

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  thawn

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• fix rapids_version

  thawn

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• do not update apt packages to avoid updating the nvidia cuda installation

  thawn

  committed
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• split build into conda and pip part to make debugging faster

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• made docker-push.sh executable

  thawn

  committed
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• fix CUDA_ERROR_OPERATING_SYSTEM

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  thawn

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• first attempt at a github CI workflow that builds the dependency container

  thawn

  committed
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• attempt to prevent running out of disk space

  thawn

  committed
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• increase space reserved on root

  thawn

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• increase space on root

  thawn

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• shorten name, increase space

  thawn

  committed
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• reduced space

  thawn

  committed
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Commits on May 6, 2024

• less verbose apt-get output

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  thawn

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• disable Updating database messages from apt

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  thawn

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• switch to noninteractive debian frontend

  thawn

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• apparently DEBIAN_FRONTEND=noninteractive is not sufficient

  thawn

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• build both deps and final image

  thawn

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• improved documentation and naming

  thawn

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• rename docker github action yml file

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• added release note

  thawn

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• fix trailing white space

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• fix trailing white space

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• more verbose job step name

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• Merge branch 'main' into docker

  Intron7

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Commits on May 7, 2024

• use admin setting

  flying-sheep

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• Merge branch 'main' into docker

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• worth a try

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• trigger GitHub actions

  thawn

  committed
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• Merge branch 'docker' of github.com:thawn/rapids_singlecell into docker

  thawn

  committed
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• Try to increase disk space more

  thawn

  committed
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• reserved disk space was too much

  thawn

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• try to reduce swap size

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• try smaller rootfs size

  thawn

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• fix cache repo

  thawn

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Commits on May 8, 2024

• push only releases to registry

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• try without build context

  thawn

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• try to use digest as build context

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• try another build context

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• try another build context

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• trigger GitHub actions

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• list available docker images

  thawn

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• another build context

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• moved listing docker images to the end

  thawn

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Commits on May 10, 2024

• Safer script

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