chmod scripts + update config for parallel test

scilus · Dec 12, 2024 · 3db7caa · 3db7caa
1 parent c25fcd8
commit 3db7caa
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Showing 9 changed files with 4 additions and 2 deletions.
diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
@@ -56,7 +56,7 @@ jobs:
       - name: Run tests
         run: |
           export C_INCLUDE_PATH=$pythonLocation/include/python${{ steps.python-selector.outputs.python-version }}:$C_INCLUDE_PATH
-          pytest -n logical --cov-report term-missing:skip-covered
+          pytest -n logical --dist worksteal --cov-report term-missing:skip-covered
 
       - name: Save test results and coverage
         uses: actions/upload-artifact@v4

diff --git a/pytest.ini b/pytest.ini
@@ -28,6 +28,7 @@ required_plugins =
     pytest-mock
     pytest-html
     pytest-cov
+    pytest-xdist
 
 junit_logging = out-err
 

diff --git a/requirements.txt b/requirements.txt
@@ -36,6 +36,7 @@ pyparsing==3.0.*
 PySocks==1.7.*
 pytest==7.2.*
 pytest-xdist==3.6.*
+pytest-xdist[psutil]==3.6.*
 pytest-console-scripts==1.3.*
 pytest-cov==4.1.0
 pytest-html==4.1.1

diff --git a/scilpy/tractograms/tests/test_streamline_and_mask_operations.py b/scilpy/tractograms/tests/test_streamline_and_mask_operations.py
@@ -92,7 +92,7 @@ def test_get_endpoints_density_map_five_points():
 
     result = nib.load(in_result).get_fdata()
 
-    assert np.allclose(endpoints_map, result)
+    assert np.allclose(endpoints_map, result, rtol=1e-03)
 
 
 def test_get_head_tail_density_maps():

diff --git a/scripts/scil_connectivity_compute_simple_matrix.py b/scripts/scil_connectivity_compute_simple_matrix.py
diff --git a/scripts/scil_fibertube_score_tractogram.py b/scripts/scil_fibertube_score_tractogram.py
diff --git a/scripts/scil_fibertube_tracking.py b/scripts/scil_fibertube_tracking.py
diff --git a/scripts/scil_tractogram_filter_collisions.py b/scripts/scil_tractogram_filter_collisions.py
diff --git a/scripts/scil_viz_tractogram_collisions.py b/scripts/scil_viz_tractogram_collisions.py