Merge pull request #6 from gagnonanthony/dev #1
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| name: CI | |
| on: [push, pull_request] | |
| jobs: | |
| pipeline-compilation: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: nf-core/setup-nextflow@v1 | |
| - name: Run pipeline | |
| run: | | |
| nextflow run ${GITHUB_WORKSPACE} --help | |
| nextflow run ${GITHUB_WORKSPACE} --help -profile tracking | |
| nextflow run ${GITHUB_WORKSPACE} --help -profile tracking,infant | |
| nextflow run ${GITHUB_WORKSPACE} --help -profile connectomics | |
| nextflow run ${GITHUB_WORKSPACE} --help -profile connectomics,infant | |
| nextflow run ${GITHUB_WORKSPACE} --help -profile tracking,connectomics | |
| nextflow run ${GITHUB_WORKSPACE} --help -profile tracking,connectomics,infant | |
| nextflow run ${GITHUB_WORKSPACE} --help -profile freesurfer | |
| nextflow run ${GITHUB_WORKSPACE} --help -profile freesurfer,connectomics | |
| nextflow run ${GITHUB_WORKSPACE} --help -profile freesurfer,connectomics,tracking |