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@scicompuu

Scientific Computing at Uppsala University

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  1. prophaser prophaser Public

    Forked from kausmees/prophaser

    Imputation of genotype data based on the full probabilistic Li and Stephens model

    C++ 5 2

  2. sbplib sbplib Public

    Matlab library for prototyping Summation-by-parts finite-differences schemes. Mirror of https://bitbucket.org/sbpteam/sbplib/

    MATLAB 3 2

  3. sesegpu sesegpu Public

    Repository for SeSE course GPU programming for Machine Learning and Data Processing

    Jupyter Notebook 3 2

  4. cannyfs cannyfs Public

    Forked from cnettel/cannyfs

    A shim file system giving excellent throughput by assuming all I/O operations CAN complete successfully.

    C++

  5. cnF2freq cnF2freq Public

    Forked from cnettel/cnF2freq

    Compute haplotype and genotype probabilities, and perform imputation, in arbitrary pedigrees, including cases under possible observational errors.

    C++

  6. mpca mpca Public

    Forked from kausmees/mpca

    methods for handling missing data in PCA

    Python

Repositories

Showing 10 of 10 repositories
  • prophaser Public Forked from kausmees/prophaser

    Imputation of genotype data based on the full probabilistic Li and Stephens model

    scicompuu/prophaser’s past year of commit activity
    C++ 5 BSD-3-Clause 3 0 0 Updated Mar 12, 2024
  • GenoCAE Public Forked from kausmees/GenoCAE

    Convolutional autoencoder for genotype data

    scicompuu/GenoCAE’s past year of commit activity
    Python 0 BSD-3-Clause 10 0 0 Updated Feb 22, 2022
  • sesegpu Public

    Repository for SeSE course GPU programming for Machine Learning and Data Processing

    scicompuu/sesegpu’s past year of commit activity
    Jupyter Notebook 3 Apache-2.0 2 0 0 Updated Nov 12, 2021
  • sbplib Public

    Matlab library for prototyping Summation-by-parts finite-differences schemes. Mirror of https://bitbucket.org/sbpteam/sbplib/

    scicompuu/sbplib’s past year of commit activity
    MATLAB 3 2 0 0 Updated Jan 22, 2021
  • HaploCluster Public Forked from camcl/HaploCluster

    Clustering a set of haplotypes by successive splitting and merging steps.

    scicompuu/HaploCluster’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated May 28, 2020
  • TypeAnnotateCheck Public Forked from camcl/TypeAnnotateCheck
    scicompuu/TypeAnnotateCheck’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Jun 17, 2019
  • sciope Public Forked from StochSS/sciope
    scicompuu/sciope’s past year of commit activity
    Python 0 11 0 0 Updated May 29, 2019
  • mpca Public Forked from kausmees/mpca

    methods for handling missing data in PCA

    scicompuu/mpca’s past year of commit activity
    Python 0 3 0 0 Updated Apr 17, 2019
  • cannyfs Public Forked from cnettel/cannyfs

    A shim file system giving excellent throughput by assuming all I/O operations CAN complete successfully.

    scicompuu/cannyfs’s past year of commit activity
    C++ 0 GPL-2.0 3 0 0 Updated Apr 5, 2018
  • cnF2freq Public Forked from cnettel/cnF2freq

    Compute haplotype and genotype probabilities, and perform imputation, in arbitrary pedigrees, including cases under possible observational errors.

    scicompuu/cnF2freq’s past year of commit activity
    C++ 0 BSD-3-Clause 2 0 0 Updated Jan 23, 2018

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