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SECOMO: A SEquence COntext MOdeler

Extract motifs and their context from DNA sequences.

Build Status codecov Documentation Status License: GPL v3

This package contains functionality to extract redundant DNA sequence features from a set of provided sequences. The package also contains utilities for plotting the revealed motifs and conducting clustering analysis based on the revealed motifs.

A comprehensive documatentation, including a tutorial on how to use the package can be found here: SECOMO Docs

For more information on the method and analysis, please refer to our preprint

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Unsupervised learning of DNA sequence features

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