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piOxiDB-data-process-pipeline

This repository contains the data process pipeline for identifying piRNAs from sodium periodate treatment small RNA data. The piOxiDB can be found here.

This pipeline is written in Python 3.X.

FastQC, MultiQC, Cutadapt, STAR, and PePr are needed to run this Python code.

See more details, run:

python pioxidata.process.py -h

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