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LF.8.1.1+S:478E (10 seqs, 9 countries) #1929

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xz-keg opened this issue Aug 26, 2024 · 9 comments
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LF.8.1.1+S:478E (10 seqs, 9 countries) #1929

xz-keg opened this issue Aug 26, 2024 · 9 comments
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2nuc mutation designated Emerged in an undersampled area Actual infection toll may be much larger than number of sequences suggest LF.8.1.1 S:478 Stepwise evolution Ladder like evolution
Milestone
ND.2

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@xz-keg
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xz-keg commented Aug 26, 2024

LF.8.1.1+A22994G(S:K478E)

GISAID query: A22994G,C9169T, C21654T
No. of seqs: 4(USA 3(1 from Iceland 1 from India) Japan 1(from India))

First: EPI_ISL_19241028, 2024-6-22, USA from India
Latest: EPI_ISL_19358514, 2024-8-12, USA from Iceland

usher
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@xz-keg xz-keg added 2nuc mutation Emerged in an undersampled area Actual infection toll may be much larger than number of sequences suggest labels Aug 26, 2024
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xz-keg commented Aug 31, 2024

+1 Slovenia

@xz-keg xz-keg changed the title LF.8.1.1+S:478E (4 seqs, 4 countries) LF.8.1.1+S:478E (5 seqs, 5 countries) Aug 31, 2024
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xz-keg commented Sep 17, 2024 •
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+1 Taiwan, China

@xz-keg xz-keg changed the title LF.8.1.1+S:478E (5 seqs, 5 countries) LF.8.1.1+S:478E (6 seqs, 6 countries) Sep 17, 2024
@FedeGueli
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+1 China

the last one has S:R1014S: in the past S:R1014K was successful in BV.1 (BA.5.2 descendant) , it doesn't seem to alter fusogenicty :
Screenshot 2024-09-17 alle 09 49 07

@xz-keg
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xz-keg commented Sep 17, 2024

+1 Canada

@xz-keg xz-keg changed the title LF.8.1.1+S:478E (6 seqs, 6 countries) LF.8.1.1+S:478E (7 seqs, 7 countries) Sep 17, 2024
@FedeGueli FedeGueli added Apparently slow It means that a lineage is accumulating sequences slowly not that it is intrinsically slow. and removed Rapid review needed labels Sep 30, 2024
@FedeGueli FedeGueli changed the title LF.8.1.1+S:478E (7 seqs, 7 countries) LF.8.1.1+S:478E (9 seqs, 9 countries) Oct 3, 2024
@FedeGueli FedeGueli added the To be proposed Green light for proposal label Oct 3, 2024
@FedeGueli
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9 Sweden, NZL
9 seqs 9 countries 4 continents quite a thing.

Please propose it when it reaches 15

@FedeGueli FedeGueli removed the Apparently slow It means that a lineage is accumulating sequences slowly not that it is intrinsically slow. label Oct 3, 2024
@FedeGueli FedeGueli mentioned this issue Oct 5, 2024
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@DailyCovidCases
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DailyCovidCases commented Oct 9, 2024 •
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Still 9 seqs, it's slowing down now
usher
Screenshot (253)

@FedeGueli
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3/9 in September from three continents

@xz-keg
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xz-keg commented Oct 19, 2024

+1 USA-NM

@xz-keg xz-keg changed the title LF.8.1.1+S:478E (9 seqs, 9 countries) LF.8.1.1+S:478E (10 seqs, 9 countries) Oct 19, 2024
@FedeGueli FedeGueli added this to the ND.2 milestone Oct 20, 2024
@FedeGueli FedeGueli added designated and removed To be proposed Green light for proposal labels Oct 20, 2024
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Designated ND.2 via cov-lineages/pango-designation@bb7b4ed

FedeGueli referenced this issue in cov-lineages/pango-designation Oct 20, 2024
@corneliusroemer
Designate LF.8.1.1 sublineages (ND)
bb7b4ed
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2nuc mutation designated Emerged in an undersampled area Actual infection toll may be much larger than number of sequences suggest LF.8.1.1 S:478 Stepwise evolution Ladder like evolution
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