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Small lineage monitor:KP.3.3 one singlet with S:A475V (1seq from Thailand) #1554

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Memorablea opened this issue May 10, 2024 · 3 comments
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KP.3 S:475 Singlet One only sample.

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@Memorablea
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Memorablea commented May 10, 2024

KP.3 with Orf9b:P3H ( proposed in #2579) got one singlet with S:A475V (1seq from Thailand)
KP.3 >C25006T,G28884C(N:R204P) + C28291A(Orf9b:P3H) + C22986T(S:A475V)

GISAID query: C7113T, G17334T, T22928C, C22986T, C23191T, G24872T, C25006T, G28884C
Alternative query proposed by mod: C22986T, C23191T,C28291A

First: EPI_ISL_19130073,Thailand,2024-04-17
image
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_58308_dda470.json?f_userOrOld=uploaded%20sample

@FedeGueli FedeGueli added Singlet One only sample. S:475 KP.3 labels May 10, 2024
@FedeGueli FedeGueli changed the title Small lineage monitor:KP.3 with S:A475V (1seq from Thailand) Small lineage monitor:KP.3 with Orf9b:P3H ( proposed in #2579) got one singlet with S:A475V (1seq from Thailand) May 10, 2024
@FedeGueli
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FedeGueli commented May 10, 2024

Thank you good catch , i ve edited a bit to add some info and a shorter query.
It is a sublineage of cov-lineages/pango-designation#2579

@Memorablea
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Thank you good catch , i ve edited a bit to add some info and a shorter query. It is a sublineage of cov-lineages/pango-designation#2579

THX

@Memorablea
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The previous level has been designated as KP.3.3

@Memorablea Memorablea changed the title Small lineage monitor:KP.3 with Orf9b:P3H ( proposed in #2579) got one singlet with S:A475V (1seq from Thailand) Small lineage monitor:KP.3.3 one singlet with S:A475V (1seq from Thailand) May 18, 2024
@Memorablea Memorablea closed this as not planned Won't fix, can't repro, duplicate, stale Jun 16, 2024
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