JN.1+ORF1ab:S2242F+S:F456L+S:N960S(18 sequences, mainly in Europe)

[Outpfmance]

Sub-lineage of:JN.1
Earliest sequence: EPI_ISL_19205731,France,2024-5-28
Latest sequence: EPI_ISL_19229746,USA,2024-6-19
Countries:USA(2),France(2),Ireland(5),Spain(2)
Number of Sequences:12
GISAID query: A24441G,C6990T,T22928C(Edited)
UShER Tree: https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/singleSubtreeAuspice_genome_1556c_5696d0.json?f_userOrOld=uploaded%20sample&label=id:node_5614567

[FedeGueli]

thx i ve added a nuc query: C13405T, T17599C, T20185C

[FedeGueli]

it looks like a cluster , lets keep it open until the end of the month

[FedeGueli]

Confirmed it was just a cluster closing it for now

[xz-keg]

S:P812A may be a cluster, but JN.1+ORF1ab:S2242F+S:N960S seems to grow large. Query A24441G,C6990T finds 146.

[xz-keg]

There is an S:F456L sub-branch emerging from this.

[FedeGueli]

There is an S:F456L sub-branch emerging from this.

Branch 111 ??

[xz-keg]

There is an S:F456L sub-branch emerging from this.

Branch 111 ??

Yeah.

[Outpfmance]

https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/singleSubtreeAuspice_genome_1556c_5696d0.json?f_userOrOld=uploaded%20sample&label=id:node_5614567

This is a branch of the F456L, which became popular in Europe at the beginning of June, and a small portion of which also has the R346T.
I think we can reopen the issue. @FedeGueli
Thanks @aviczhl2
GISAID query: A24441G,C6990T,T22928C

[FedeGueli]

Thx @Outpfmance !

[FedeGueli]

Pls update the main text of the proposal @Outpfmance

[Outpfmance]

18 sequences now

[FedeGueli]

Pls propose it

[FedeGueli]

@Outpfmance pls propose it.

[Outpfmance]

@FedeGueli OK, I have already opened the issue, I don't know why I didn't open it last time.
cov-lineages/pango-designation#2692

[FedeGueli]

Thanks!