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JD.1.1+S:Q677R(45 seqs, 3 countries) #1079

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xz-keg opened this issue Nov 12, 2023 · 3 comments
Closed

JD.1.1+S:Q677R(45 seqs, 3 countries) #1079

xz-keg opened this issue Nov 12, 2023 · 3 comments
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FLip = S:L455F / S:F456L Rapid review needed S:475 s:677 Small clusters ?? This label identifies lineages with very few sequences,allowing to track them for a couple of weeks
Milestone
JD.1.1.5

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@xz-keg
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xz-keg commented Nov 12, 2023

JD.1.1+C1102T+A5608G+C15579T+A23592G(S:Q677R)

GISAID query: C15579T,A23592G,A5608G
No. of seqs: 15(USA 10(1 from Italy), Canada 5)

First:EPI_ISL_18442435, USA, 2023-9-18
Latest: EPI_ISL_18493168, Canada, 2023-10-30

usher

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@FedeGueli FedeGueli changed the title JD.1.1+S:Q677R(15 seqs, 3 countries) JD.1.1+S:Q677R(16 seqs, 3 countries) Nov 14, 2023
@FedeGueli
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+1 NY

@xz-keg xz-keg changed the title JD.1.1+S:Q677R(16 seqs, 3 countries) JD.1.1+S:Q677R(25 seqs, 3 countries) Nov 18, 2023
@FedeGueli FedeGueli added the Small clusters ?? This label identifies lineages with very few sequences,allowing to track them for a couple of weeks label Nov 20, 2023
@olias120676
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  • 4 USA and +11 Canada, now up to 36

@xz-keg xz-keg changed the title JD.1.1+S:Q677R(25 seqs, 3 countries) JD.1.1+S:Q677R(36 seqs, 3 countries) Nov 23, 2023
@xz-keg xz-keg changed the title JD.1.1+S:Q677R(36 seqs, 3 countries) JD.1.1+S:Q677R(45 seqs, 3 countries) Nov 28, 2023
@xz-keg
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xz-keg commented Dec 2, 2023

Designated JD.1.1.5

@xz-keg xz-keg closed this as completed Dec 2, 2023
@xz-keg xz-keg added this to the JD.1.1.5 milestone Dec 2, 2023
FedeGueli referenced this issue in cov-lineages/pango-designation Dec 2, 2023
@corneliusroemer
Designate JD.1.1.5 ( S:Q677R, USA/Canada) with 40 seqs
23f0643
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FLip = S:L455F / S:F456L Rapid review needed S:475 s:677 Small clusters ?? This label identifies lineages with very few sequences,allowing to track them for a couple of weeks
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Milestone
JD.1.1.5
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@xz-keg @olias120676 @FedeGueli